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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

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  • STRUCTURE

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  • SCGN
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

34.265
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:42.4 nTPM
HPA Brain:92.9 nTPM
GTEx:42.4 nTPM
Pig:19.1 nTPM
Mouse:5.2 nTPM
Allen mouse:0.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB044060
Hypothalamus mean intensity 34.265
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 1.176
Periventricular hypothalamic nucleus 17.939
Supraoptic nucleus 12.995
Tuberal nucleus 34.265
Ventral tuberomammillary nucleus -
Lateral preoptic area 4.288
Medial preoptic area 4.039
Suprachiasmatic nucleus 14.635
Paraventricular hypothalamic nucleus 8.510
Anterior hypothalamic area, central -
Ventral medial hypothalamic nucleus 21.944
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 30.196
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 6.003
Dorsal medial hypothalamic nucleus 10.900
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 3.6
2226 Male, age 75, left hemisphere 6.2
1961 Female, age 42, unknown 0.9
Dorsomedial nucleus
nTPM: 2.9
2017 Female, age 42, unknown 8.8
1989 Male, age 62, unknown 0.0
2041 Female, age 72, unknown 0.0
Lateral hypothalamic area
nTPM: 53.5
2412 Male, age 62, unknown 102.3
1791 Male, age 80, right hemisphere 81.5
2228 Male, age 66, unknown 23.9
2271 Male, age 75, both hemispheres 6.5
Mammillary body
nTPM: 0.0
1923 Female, age 72, unknown 0.2
2413 Male, age 66, unknown 0.1
1834 Female, age 42, unknown 0.0
1945 Male, age 80, right hemisphere 0.0
1948 Female, age 72, unknown 0.0
Paraventricular nucleus
nTPM: 18.1
2700 Male, age 62, unknown 18.1
Preoptic area
nTPM: 43.3
1907 Male, age 80, right hemisphere 66.7
1861 Female, age 42, unknown 63.0
2414 Female, age 72, unknown 0.2
Supraoptic nucleus
nTPM: 92.9
2835 Female, age 72, unknown 150.6
2043 Male, age 62, unknown 88.6
1894 Female, age 72, unknown 39.3
Ventromedial nucleus
nTPM: 0.3
1822 Female, age 42, unknown 0.6
1982 Female, age 72, unknown 0.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 42.4
Samples: 257

Max nTPM: 451.8
Min nTPM: 0.0
Std nTPM: 73.4
Median nTPM: 9.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 451.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 420.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 403.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 327.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 282.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 273.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 263.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 261.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 258.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 237.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 198.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 196.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 194.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 190.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 182.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 178.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 172.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 170.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 170.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 169.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 161.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 160.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 140.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 129.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 127.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 127.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 122.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 120.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 117.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 115.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 115.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 112.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 110.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 107.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 106.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 101.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 100.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 96.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 93.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 91.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 89.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 84.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 84.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 81.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 79.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 79.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 75.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 73.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 72.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 71.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 70.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 67.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 65.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 64.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 64.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 63.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 62.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 61.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 60.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 59.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 54.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 53.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 52.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 52.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 50.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 50.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 49.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 48.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 45.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 45.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 45.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 43.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 37.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 37.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 36.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 36.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 34.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 33.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 31.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 31.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 31.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 30.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 29.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 29.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 28.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 28.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 28.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 27.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 27.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 26.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 25.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 23.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 22.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 21.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 21.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 21.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 20.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 20.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 20.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 20.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 18.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 17.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 17.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 16.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 16.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 15.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 14.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 14.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 14.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 14.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 14.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 14.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 13.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 13.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 13.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 12.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 12.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 12.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 12.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 11.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 11.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 10.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 10.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 10.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 10.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 10.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 9.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 9.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 9.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 8.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 8.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 8.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 8.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 8.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 7.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 7.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 7.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 7.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 7.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 7.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 6.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 6.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 6.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 6.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 6.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 6.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 5.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 5.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 5.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 5.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 5.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 5.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 4.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 4.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 4.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 4.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 4.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 4.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 4.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 4.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 3.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 3.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 3.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 3.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 3.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 3.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 3.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 3.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 3.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 3.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 2.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 2.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 2.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 2.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 2.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 2.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 2.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 2.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 2.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 2.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 2.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 2.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 2.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 2.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 2.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 2.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 2.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 2.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 2.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 2.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 2.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 2.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 2.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 2.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 2.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 2.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 2.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 2.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 1.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 1.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 1.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 1.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 1.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 1.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 1.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 1.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 1.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 1.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 1.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 1.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 0.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 0.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 0.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 0.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 0.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 0.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 0.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 0.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 0.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 0.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 0.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 0.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 0.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 0.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 0.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 0.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 0.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 0.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 0.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 0.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 0.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 0.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 0.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 0.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 0.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 0.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 0.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 0.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 0.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 0.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 0.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 0.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 0.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 0.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 19.1
Samples: 4

Max nTPM: 33.3
Min nTPM: 8.5
Sample A Female 10.5
Sample B Female 8.5
Sample C Male 33.3
Sample D Male 24.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 5.2
Samples: 4

Max nTPM: 6.3
Min nTPM: 4.5
Sample A Male 5.2
Sample B Male 6.3
Sample C Female 4.8
Sample D Female 4.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.9
583549 Antisense, RP_040831_02_G06, Mouse strain C57BL/6J (56 days, male) 0.9

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