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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • CD59
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN41 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
HIPPOCAMPAL FORMATION HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTAL AREA SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:253.6 nTPM
GTEx:293.2 nTPM
FANTOM5:269.1 Scaled Tags Per Million
Pig:17.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

253.6
Sample id Sample description nTPM
Putamen
nTPM: 253.6
2482 Female, age 94, left hemisphere 363.7
2466 Female, age 79, unknown 281.5
1838 Male, age 80, right hemisphere 266.7
1937 Female, age 91, right hemisphere 240.1
2489 Female, age 72, unknown 233.6
1829 Male, age 74, unknown 203.0
2647 Male, age 75, left hemisphere 186.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

293.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 293.2
Samples: 254

Max nTPM: 809.6
Min nTPM: 124.8
Std nTPM: 103.8
Median nTPM: 262.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 809.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 790.2
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 625.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 566.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 565.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 565.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 547.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 544.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 536.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 536.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 525.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 511.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 500.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 489.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 479.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 470.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 467.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 467.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 466.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 460.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 452.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 444.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 444.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 435.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 432.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 428.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 426.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 419.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 417.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 414.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 412.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 409.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 405.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 402.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 401.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 397.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 395.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 394.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 394.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 391.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 389.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 388.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 385.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 380.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 380.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 372.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 369.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 368.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 368.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 362.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 362.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 362.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 360.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 356.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 356.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 355.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 355.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 355.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 354.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 351.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 349.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 348.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 348.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 345.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 345.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 345.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 343.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 342.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 338.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 337.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 336.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 332.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 331.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 329.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 327.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 326.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 321.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 317.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 316.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 313.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 310.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 310.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 310.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 308.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 306.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 305.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 305.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 304.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 303.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 302.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 301.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 297.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 294.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 293.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 292.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 292.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 291.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 290.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 289.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 287.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 286.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 284.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 283.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 282.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 281.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 279.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 276.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 275.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 274.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 274.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 272.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 271.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 271.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 271.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 271.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 270.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 270.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 269.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 269.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 268.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 268.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 267.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 265.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 263.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 263.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 263.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 262.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 262.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 262.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 261.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 261.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 261.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 261.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 261.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 260.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 258.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 258.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 258.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 257.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 257.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 257.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 256.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 256.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 256.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 255.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 254.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 254.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 253.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 253.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 252.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 252.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 252.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 249.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 249.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 248.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 248.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 248.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 248.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 247.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 247.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 246.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 245.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 244.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 243.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 241.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 239.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 239.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 237.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 236.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 234.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 234.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 234.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 231.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 229.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 229.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 229.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 229.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 228.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 228.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 228.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 228.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 226.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 226.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 225.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 225.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 223.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 223.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 221.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 220.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 219.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 219.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 219.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 217.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 217.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 216.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 216.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 215.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 214.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 213.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 213.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 213.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 212.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 212.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 211.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 211.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 209.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 209.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 209.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 209.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 208.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 207.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 207.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 206.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 206.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 206.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 201.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 201.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 200.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 200.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 199.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 199.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 199.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 199.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 198.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 198.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 197.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 195.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 194.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 192.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 188.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 187.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 187.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 185.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 185.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 185.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 184.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 183.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 183.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 180.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 180.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 179.9
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 179.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 179.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 176.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 176.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 175.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 174.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 173.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 171.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 170.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 163.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 159.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 131.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 124.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

269.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 269.1
FF:10176-103C5 60 years, female 269.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.9
Pig sample Sample description nTPM
Putamen
nTPM: 17.9
Samples: 3

Max nTPM: 22.2
Min nTPM: 15.2
Sample B Female 15.2
Sample C Male 22.2
Sample D Male 16.2

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