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  • AK6
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:41.2 nTPM
HPA Brain:16.2 nTPM
GTEx:41.2 nTPM
Pig:10.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 14.7
2226 Male, age 75, left hemisphere 17.8
1961 Female, age 42, unknown 11.6
Dorsomedial nucleus
nTPM: 12.8
2041 Female, age 72, unknown 14.5
2017 Female, age 42, unknown 14.2
1989 Male, age 62, unknown 9.9
Lateral hypothalamic area
nTPM: 13.3
2228 Male, age 66, unknown 15.7
2271 Male, age 75, both hemispheres 13.2
1791 Male, age 80, right hemisphere 12.3
2412 Male, age 62, unknown 12.0
Mammillary body
nTPM: 14.5
1834 Female, age 42, unknown 15.8
2413 Male, age 66, unknown 15.2
1945 Male, age 80, right hemisphere 14.6
1948 Female, age 72, unknown 14.4
1923 Female, age 72, unknown 12.2
Paraventricular nucleus
nTPM: 16.2
2700 Male, age 62, unknown 16.2
Preoptic area
nTPM: 13.3
1907 Male, age 80, right hemisphere 15.2
2414 Female, age 72, unknown 12.6
1861 Female, age 42, unknown 12.0
Supraoptic nucleus
nTPM: 15.2
2043 Male, age 62, unknown 17.0
1894 Female, age 72, unknown 15.7
2835 Female, age 72, unknown 13.0
Ventromedial nucleus
nTPM: 14.7
1822 Female, age 42, unknown 16.0
1982 Female, age 72, unknown 13.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 41.2
Samples: 257

Max nTPM: 82.9
Min nTPM: 18.7
Std nTPM: 8.8
Median nTPM: 39.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 82.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 76.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 75.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 69.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 67.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 66.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 66.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 64.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 59.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 57.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 57.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 56.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 56.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 56.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 56.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 55.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 55.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 54.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 52.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 52.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 51.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 51.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 51.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 51.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 51.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 51.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 51.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 50.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 50.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 50.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 49.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 49.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 49.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 49.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 49.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 49.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 49.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 48.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 48.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 48.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 48.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 48.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 48.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 47.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 47.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 47.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 47.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 47.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 47.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 47.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 47.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 46.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 46.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 46.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 46.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 46.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 46.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 46.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 46.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 46.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 46.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 46.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 46.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 46.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 46.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 45.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 45.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 45.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 45.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 45.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 45.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 45.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 45.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 45.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 44.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 44.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 44.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 44.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 44.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 44.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 44.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 44.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 44.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 44.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 43.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 43.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 43.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 43.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 43.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 43.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 43.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 43.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 43.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 43.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 43.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 42.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 42.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 42.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 42.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 42.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 42.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 42.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 42.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 41.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 41.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 41.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 41.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 41.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 41.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 41.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 41.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 41.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 41.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 41.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 40.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 40.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 40.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 40.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 40.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 40.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 40.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 40.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 40.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 39.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 39.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 39.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 39.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 39.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 39.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 39.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 39.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 39.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 39.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 39.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 39.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 39.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 39.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 39.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 39.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 39.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 39.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 39.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 38.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 38.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 38.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 38.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 38.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 38.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 38.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 38.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 38.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 38.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 38.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 38.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 38.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 38.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 38.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 38.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 38.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 37.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 37.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 37.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 37.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 37.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 37.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 37.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 37.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 37.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 37.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 37.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 37.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 36.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 36.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 36.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 36.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 36.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 36.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 36.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 36.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 36.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 36.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 35.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 35.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 35.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 35.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 35.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 35.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 35.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 35.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 35.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 35.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 35.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 35.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 35.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 35.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 35.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 35.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 35.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 34.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 34.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 34.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 34.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 34.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 34.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 34.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 34.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 34.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 34.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 34.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 34.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 34.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 33.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 33.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 33.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 33.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 33.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 33.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 33.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 33.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 33.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 33.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 33.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 33.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 32.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 32.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 32.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 32.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 32.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 32.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 32.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 32.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 32.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 32.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 31.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 31.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 31.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 31.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 30.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 30.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 30.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 30.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 30.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 30.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 30.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 30.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 29.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 29.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 29.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 28.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 28.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 28.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 27.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 27.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 25.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 24.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 20.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 18.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 10.0
Samples: 4

Max nTPM: 11.6
Min nTPM: 7.5
Sample A Female 7.5
Sample B Female 9.4
Sample C Male 11.4
Sample D Male 11.6

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