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BETA
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  • WDR47
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:5.9 nTPM
Monaco:29.3 nTPM
Schmiedel:33.0 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

5.9
HPA sample nTPM
Classical monocyte
nTPM: 5.4
Samples: 6

Max nTPM: 7.6
Min nTPM: 3.8
P10809_1003 7.6
P10809_1020 5.1
P10809_1039 3.8
P10809_1058 7.1
P10809_1080 4.6
P10809_1107 4.4
Intermediate monocyte
nTPM: 5.7
Samples: 6

Max nTPM: 12.1
Min nTPM: 3.1
P10809_1004 5.3
P10809_1023 5.2
P10809_1042 3.1
P10809_1061 12.1
P10809_1081 3.3
P10809_1108 5.0
Non-classical monocyte
nTPM: 5.9
Samples: 5

Max nTPM: 8.2
Min nTPM: 4.7
P10809_1005 5.4
P10809_1053 6.1
P10809_1072 8.2
P10809_1082 4.7
P10809_1109 5.1

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

29.3
Monaco sample nTPM
Classical monocyte
nTPM: 23.8
Samples: 4

Max nTPM: 26.9
Min nTPM: 22.3
RHH5313_R3680 26.9
RHH5221_R3593 23.0
RHH5250_R3622 22.9
RHH5279_R3651 22.3
Intermediate monocyte
nTPM: 24.0
Samples: 4

Max nTPM: 26.3
Min nTPM: 21.3
RHH5314_R3681 22.8
RHH5222_R3594 26.3
RHH5251_R3623 21.3
RHH5280_R3652 25.4
Non-classical monocyte
nTPM: 29.3
Samples: 4

Max nTPM: 32.6
Min nTPM: 27.2
RHH5315_R3682 28.5
RHH5223_R3595 28.8
RHH5252_R3624 27.2
RHH5281_R3653 32.6

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

33.0
Schmiedel sample id TPM
Classical monocyte
TPM: 24.3
Samples: 91

Max TPM: 30.7
Min TPM: 16.6
MONOCYTES_1 30.7
MONOCYTES_2 30.7
MONOCYTES_3 30.2
MONOCYTES_4 29.6
MONOCYTES_5 29.2
MONOCYTES_6 29.1
MONOCYTES_7 28.4
MONOCYTES_8 28.4
MONOCYTES_9 28.4
MONOCYTES_10 28.4
MONOCYTES_11 28.3
MONOCYTES_12 28.2
MONOCYTES_13 28.2
MONOCYTES_14 27.8
MONOCYTES_15 27.4
MONOCYTES_16 27.1
MONOCYTES_17 27.1
MONOCYTES_18 27.0
MONOCYTES_19 26.9
MONOCYTES_20 26.9
MONOCYTES_21 26.7
MONOCYTES_22 26.6
MONOCYTES_23 26.3
MONOCYTES_24 26.2
MONOCYTES_25 26.2
MONOCYTES_26 26.2
MONOCYTES_27 26.2
MONOCYTES_28 26.1
MONOCYTES_29 26.0
MONOCYTES_30 25.9
MONOCYTES_31 25.8
MONOCYTES_32 25.7
MONOCYTES_33 25.7
MONOCYTES_34 25.5
MONOCYTES_35 25.3
MONOCYTES_36 25.3
MONOCYTES_37 25.3
MONOCYTES_38 25.2
MONOCYTES_39 25.2
MONOCYTES_40 25.2
MONOCYTES_41 25.1
MONOCYTES_42 25.1
MONOCYTES_43 25.0
MONOCYTES_44 24.4
MONOCYTES_45 24.2
MONOCYTES_46 23.9
MONOCYTES_47 23.7
MONOCYTES_48 23.6
MONOCYTES_49 23.5
MONOCYTES_50 23.5
MONOCYTES_51 23.4
MONOCYTES_52 23.4
MONOCYTES_53 23.4
MONOCYTES_54 23.2
MONOCYTES_55 23.2
MONOCYTES_56 23.1
MONOCYTES_57 23.1
MONOCYTES_58 23.1
MONOCYTES_59 22.9
MONOCYTES_60 22.9
MONOCYTES_61 22.8
MONOCYTES_62 22.8
MONOCYTES_63 22.6
MONOCYTES_64 22.6
MONOCYTES_65 22.6
MONOCYTES_66 22.6
MONOCYTES_67 22.5
MONOCYTES_68 22.3
MONOCYTES_69 22.2
MONOCYTES_70 22.1
MONOCYTES_71 22.0
MONOCYTES_72 22.0
MONOCYTES_73 21.9
MONOCYTES_74 21.8
MONOCYTES_75 21.8
MONOCYTES_76 21.7
MONOCYTES_77 21.4
MONOCYTES_78 21.3
MONOCYTES_79 21.3
MONOCYTES_80 21.3
MONOCYTES_81 20.9
MONOCYTES_82 20.6
MONOCYTES_83 20.4
MONOCYTES_84 20.4
MONOCYTES_85 20.3
MONOCYTES_86 20.2
MONOCYTES_87 19.6
MONOCYTES_88 18.4
MONOCYTES_89 17.8
MONOCYTES_90 16.9
MONOCYTES_91 16.6
Show allShow less
Non-classical monocyte
TPM: 33.0
Samples: 90

Max TPM: 52.5
Min TPM: 23.6
M2_1 52.5
M2_2 46.2
M2_3 43.8
M2_4 42.9
M2_5 42.3
M2_6 42.3
M2_7 42.2
M2_8 41.4
M2_9 40.7
M2_10 40.6
M2_11 40.2
M2_12 39.9
M2_13 38.8
M2_14 38.8
M2_15 38.1
M2_16 38.0
M2_17 37.8
M2_18 37.6
M2_19 37.1
M2_20 36.2
M2_21 36.2
M2_22 36.1
M2_23 35.1
M2_24 35.1
M2_25 35.1
M2_26 34.8
M2_27 34.7
M2_28 34.6
M2_29 34.6
M2_30 34.3
M2_31 34.2
M2_32 34.0
M2_33 34.0
M2_34 33.7
M2_35 33.4
M2_36 33.2
M2_37 33.0
M2_38 32.9
M2_39 32.7
M2_40 32.6
M2_41 32.6
M2_42 32.4
M2_43 32.3
M2_44 32.3
M2_45 32.2
M2_46 32.2
M2_47 32.2
M2_48 32.0
M2_49 31.9
M2_50 31.8
M2_51 31.6
M2_52 31.4
M2_53 31.2
M2_54 30.9
M2_55 30.8
M2_56 30.8
M2_57 30.8
M2_58 30.6
M2_59 30.2
M2_60 30.0
M2_61 29.9
M2_62 29.9
M2_63 29.8
M2_64 29.4
M2_65 29.4
M2_66 29.3
M2_67 29.3
M2_68 29.3
M2_69 29.3
M2_70 29.2
M2_71 29.2
M2_72 29.1
M2_73 29.1
M2_74 29.0
M2_75 29.0
M2_76 28.6
M2_77 28.6
M2_78 28.5
M2_79 28.1
M2_80 28.1
M2_81 28.0
M2_82 27.1
M2_83 26.7
M2_84 26.0
M2_85 25.7
M2_86 25.3
M2_87 25.3
M2_88 24.7
M2_89 24.1
M2_90 23.6
Show allShow less

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