A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
67.5
nTPM
Monaco:
139.2
nTPM
Schmiedel:
83.7
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
67.5
HPA sample
nTPM
Classical monocyte nTPM: 50.4
Samples: 6
Max nTPM: 68.5
Min nTPM: 41.5
P10809_1003
41.5
P10809_1020
50.1
P10809_1039
68.5
P10809_1058
42.9
P10809_1080
50.3
P10809_1107
49.1
Intermediate monocyte nTPM: 56.6
Samples: 6
Max nTPM: 74.8
Min nTPM: 43.8
P10809_1004
44.5
P10809_1023
65.6
P10809_1042
74.8
P10809_1061
43.8
P10809_1081
52.3
P10809_1108
58.3
Non-classical monocyte nTPM: 67.5
Samples: 5
Max nTPM: 79.8
Min nTPM: 57.4
P10809_1005
57.4
P10809_1053
72.5
P10809_1072
65.6
P10809_1082
62.3
P10809_1109
79.8
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
139.2
Monaco sample
nTPM
Classical monocyte nTPM: 139.2
Samples: 4
Max nTPM: 169.5
Min nTPM: 114.6
RHH5313_R3680
114.6
RHH5221_R3593
169.5
RHH5250_R3622
129.9
RHH5279_R3651
142.8
Intermediate monocyte nTPM: 119.8
Samples: 4
Max nTPM: 132.3
Min nTPM: 97.0
RHH5314_R3681
118.5
RHH5222_R3594
131.4
RHH5251_R3623
97.0
RHH5280_R3652
132.3
Non-classical monocyte nTPM: 119.0
Samples: 4
Max nTPM: 135.5
Min nTPM: 95.8
RHH5315_R3682
109.9
RHH5223_R3595
134.9
RHH5252_R3624
95.8
RHH5281_R3653
135.5
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
83.7
Schmiedel sample id
TPM
Classical monocyte TPM: 53.1
Samples: 91
Max TPM: 93.5
Min TPM: 34.4
MONOCYTES_1
93.5
MONOCYTES_2
89.4
MONOCYTES_3
83.2
MONOCYTES_4
75.1
MONOCYTES_5
74.5
MONOCYTES_6
73.1
MONOCYTES_7
72.2
MONOCYTES_8
70.3
MONOCYTES_9
68.7
MONOCYTES_10
68.4
MONOCYTES_11
68.2
MONOCYTES_12
68.0
MONOCYTES_13
65.8
MONOCYTES_14
65.8
MONOCYTES_15
65.0
MONOCYTES_16
63.7
MONOCYTES_17
63.1
MONOCYTES_18
62.2
MONOCYTES_19
60.8
MONOCYTES_20
60.0
MONOCYTES_21
59.0
MONOCYTES_22
59.0
MONOCYTES_23
58.9
MONOCYTES_24
58.2
MONOCYTES_25
57.6
MONOCYTES_26
57.3
MONOCYTES_27
56.9
MONOCYTES_28
56.6
MONOCYTES_29
56.5
MONOCYTES_30
56.3
MONOCYTES_31
55.8
MONOCYTES_32
55.8
MONOCYTES_33
55.5
MONOCYTES_34
55.2
MONOCYTES_35
54.2
MONOCYTES_36
54.0
MONOCYTES_37
53.7
MONOCYTES_38
53.1
MONOCYTES_39
52.8
MONOCYTES_40
52.7
MONOCYTES_41
52.2
MONOCYTES_42
51.9
MONOCYTES_43
51.9
MONOCYTES_44
51.6
MONOCYTES_45
51.6
MONOCYTES_46
51.3
MONOCYTES_47
49.7
MONOCYTES_48
49.6
MONOCYTES_49
49.6
MONOCYTES_50
49.5
MONOCYTES_51
49.4
MONOCYTES_52
49.4
MONOCYTES_53
49.1
MONOCYTES_54
49.0
MONOCYTES_55
48.6
MONOCYTES_56
48.6
MONOCYTES_57
48.3
MONOCYTES_58
48.2
MONOCYTES_59
47.8
MONOCYTES_60
46.9
MONOCYTES_61
46.1
MONOCYTES_62
45.9
MONOCYTES_63
45.7
MONOCYTES_64
45.6
MONOCYTES_65
44.9
MONOCYTES_66
44.8
MONOCYTES_67
44.8
MONOCYTES_68
44.8
MONOCYTES_69
44.5
MONOCYTES_70
44.5
MONOCYTES_71
44.3
MONOCYTES_72
44.2
MONOCYTES_73
44.2
MONOCYTES_74
44.0
MONOCYTES_75
43.0
MONOCYTES_76
42.6
MONOCYTES_77
42.2
MONOCYTES_78
42.2
MONOCYTES_79
42.1
MONOCYTES_80
41.5
MONOCYTES_81
41.3
MONOCYTES_82
41.2
MONOCYTES_83
39.9
MONOCYTES_84
39.9
MONOCYTES_85
39.7
MONOCYTES_86
38.9
MONOCYTES_87
38.9
MONOCYTES_88
38.3
MONOCYTES_89
37.6
MONOCYTES_90
35.6
MONOCYTES_91
34.4
Show allShow less
Non-classical monocyte TPM: 83.7
Samples: 90
Max TPM: 137.0
Min TPM: 56.1
M2_1
137.0
M2_2
123.1
M2_3
122.6
M2_4
121.2
M2_5
119.5
M2_6
119.1
M2_7
118.5
M2_8
113.0
M2_9
112.1
M2_10
111.7
M2_11
111.7
M2_12
109.0
M2_13
105.4
M2_14
104.5
M2_15
103.7
M2_16
98.9
M2_17
97.4
M2_18
95.9
M2_19
95.7
M2_20
95.5
M2_21
93.1
M2_22
92.9
M2_23
92.8
M2_24
91.7
M2_25
90.6
M2_26
90.1
M2_27
89.2
M2_28
87.3
M2_29
87.0
M2_30
86.9
M2_31
86.8
M2_32
86.7
M2_33
86.6
M2_34
86.4
M2_35
83.6
M2_36
83.4
M2_37
83.1
M2_38
82.2
M2_39
81.9
M2_40
81.7
M2_41
81.6
M2_42
80.9
M2_43
80.4
M2_44
79.2
M2_45
79.1
M2_46
78.9
M2_47
78.9
M2_48
78.6
M2_49
78.6
M2_50
77.3
M2_51
77.3
M2_52
76.7
M2_53
75.5
M2_54
75.0
M2_55
74.8
M2_56
74.5
M2_57
74.4
M2_58
74.3
M2_59
74.1
M2_60
73.8
M2_61
73.3
M2_62
73.1
M2_63
72.2
M2_64
71.9
M2_65
71.5
M2_66
70.9
M2_67
70.8
M2_68
70.7
M2_69
70.2
M2_70
69.7
M2_71
69.6
M2_72
69.5
M2_73
69.0
M2_74
68.9
M2_75
68.2
M2_76
68.1
M2_77
67.8
M2_78
67.4
M2_79
67.0
M2_80
66.7
M2_81
66.6
M2_82
66.2
M2_83
66.2
M2_84
65.9
M2_85
64.6
M2_86
63.8
M2_87
63.6
M2_88
63.2
M2_89
59.8
M2_90
56.1
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
