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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • EVOLUTION

  • FTL
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:2172.1 nTPM
GTEx:4200.3 nTPM
FANTOM5:1599.5 Scaled Tags Per Million
Pig:1164.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2172.1
Sample id Sample description nTPM
Putamen
nTPM: 2172.1
2482 Female, age 94, left hemisphere 3374.5
2489 Female, age 72, unknown 2456.5
2466 Female, age 79, unknown 2145.0
1829 Male, age 74, unknown 2070.8
1937 Female, age 91, right hemisphere 1833.2
2647 Male, age 75, left hemisphere 1714.4
1838 Male, age 80, right hemisphere 1610.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4200.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 4200.3
Samples: 254

Max nTPM: 16601.6
Min nTPM: 1496.4
Std nTPM: 2048.4
Median nTPM: 3596.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 16601.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 13644.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 11237.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 9543.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 9358.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 9073.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 8999.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 8920.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 8767.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 8643.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 8615.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 8517.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8281.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 8267.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 8104.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 8034.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 7997.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 7897.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 7821.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 7744.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 7687.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 7449.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 7326.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 7277.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 6987.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6982.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 6892.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 6880.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 6501.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 6489.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 6463.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 6415.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 6391.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 6369.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 6366.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 6364.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 6188.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 6157.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 6150.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 6091.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 6084.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 6074.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6067.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 6013.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 5973.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 5711.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5639.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 5636.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 5521.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 5488.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 5373.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 5337.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 5156.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 5118.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 5111.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 5050.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 5023.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 5009.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 5000.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 4931.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 4920.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 4897.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 4892.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 4862.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 4853.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 4790.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 4786.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 4784.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 4779.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 4778.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 4776.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 4769.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 4753.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 4727.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 4702.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 4696.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 4542.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 4521.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 4517.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 4474.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 4448.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 4444.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 4441.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 4417.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 4409.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 4392.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 4349.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 4348.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 4247.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 4229.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 4199.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 4193.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 4189.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 4179.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 4153.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 4143.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 4138.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 4117.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 4068.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 4039.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 4020.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 4007.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 3998.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 3994.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 3981.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 3973.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 3968.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 3965.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 3917.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 3895.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 3877.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 3852.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 3848.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 3828.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 3828.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 3781.0
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 3780.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 3732.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 3724.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 3696.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 3678.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 3669.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 3664.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 3637.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 3624.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 3621.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 3604.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 3588.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 3578.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 3561.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 3549.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 3545.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 3535.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 3533.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 3514.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 3456.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 3454.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 3446.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 3422.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 3406.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 3404.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 3392.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 3390.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 3387.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 3371.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 3325.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 3321.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 3308.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 3304.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 3296.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 3289.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 3276.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 3256.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 3251.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 3208.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 3208.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 3187.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 3186.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 3179.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 3175.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 3169.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 3152.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 3141.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 3119.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 3116.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 3105.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 3077.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 3072.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 3048.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 3046.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 3045.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 3028.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 3012.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 2995.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 2988.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 2971.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 2963.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 2955.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 2955.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 2949.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 2939.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 2935.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 2906.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 2896.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 2873.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 2861.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 2855.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 2851.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 2849.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 2849.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 2841.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 2818.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 2808.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 2806.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 2801.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 2790.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 2789.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 2781.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 2759.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 2710.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 2709.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 2707.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 2688.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2677.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 2673.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 2672.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 2661.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 2660.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 2648.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 2611.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 2595.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 2591.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 2588.6
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 2584.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 2574.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 2558.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 2558.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 2541.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 2537.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 2524.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 2496.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 2479.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 2477.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 2470.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2439.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 2435.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 2403.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 2385.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 2380.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 2347.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 2319.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 2301.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 2294.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 2280.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 2272.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 2271.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 2262.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 2260.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 2251.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 2198.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 2166.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 2159.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 2150.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 2055.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 2012.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 2002.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1968.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1879.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1843.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1818.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1752.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1635.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1609.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1496.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1599.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1599.5
FF:10176-103C5 60 years, female 1599.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1164.8
Pig sample Sample description nTPM
Putamen
nTPM: 1164.8
Samples: 3

Max nTPM: 1394.3
Min nTPM: 849.7
Sample B Female 849.7
Sample C Male 1394.3
Sample D Male 1250.3

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