HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:132.6 nTPM
HPA Brain:61.5 nTPM
GTEx:132.6 nTPM
FANTOM5:115.4 Scaled Tags Per Million
Pig:100.9 nTPM
Mouse:222.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017871Antibody HPA064293
Glial cells MediumLow
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 61.5
Sample id Sample description nTPM
Hippocampus
nTPM: 51.4
1898 Male, age 80, left hemisphere 63.9
2529 Female, age 94, left hemisphere 55.9
2621 Female, age 67, right hemisphere 50.7
1855 Male, age 76, left hemisphere 49.7
2148 Female, age 91, left hemisphere 48.1
1911 Female, age 85, right hemisphere 40.0
Dentate gyrus
nTPM: 51.4
2530 Female, age 94, left hemisphere 73.1
1927 Female, age 91, both hemispheres 53.5
2010 Male, age 76, both hemispheres 51.2
2246 Female, age 85, both hemispheres 44.5
2528 Male, age 74, both hemispheres 43.9
2531 Female, age 67, both hemispheres 42.5
Entorhinal gyrus
nTPM: 49.6
1938 Female, age 85, left hemisphere 59.7
2764 Male, age 80, right hemisphere 59.4
2117 Female, age 91, right hemisphere 52.2
1787 Male, age 76, left hemisphere 49.7
2686 Male, age 75, right hemisphere 39.5
2613 Female, age 94, left hemisphere 37.2
Hippocampus, CA1
nTPM: 52.9
2749 Male, age 80, left hemisphere 74.5
1873 Female, age 85, both hemispheres 53.1
2045 Male, age 76, both hemispheres 50.6
2527 Male, age 74, both hemispheres 49.2
2082 Female, age 91, right hemisphere 37.0
Hippocampus, CA2
nTPM: 54.1
1892 Male, age 76, both hemispheres 67.3
1963 Male, age 80, left hemisphere 61.7
1940 Female, age 85, left hemisphere 51.8
2437 Female, age 94, left hemisphere 51.4
2249 Male, age 74, both hemispheres 50.5
2113 Female, age 91, right hemisphere 41.8
Hippocampus, CA3
nTPM: 49.0
1867 Male, age 76, both hemispheres 60.3
2137 Male, age 80, left hemisphere 58.9
2436 Male, age 74, both hemispheres 54.4
1891 Female, age 85, both hemispheres 48.7
2861 Female, age 67, both hemispheres 40.5
2620 Female, age 94, left hemisphere 31.5
Parahippocampal cortex
nTPM: 49.6
1850 Male, age 80, both hemispheres 67.6
1990 Female, age 91, right hemisphere 54.1
2245 Female, age 91, both hemispheres 53.6
1933 Female, age 85, both hemispheres 52.7
2532 Female, age 72, left hemisphere 52.0
2692 Male, age 74, both hemispheres 48.9
2018 Male, age 76, both hemispheres 48.3
2250 Female, age 67, right hemisphere 43.9
2693 Female, age 94, both hemispheres 38.5
2622 Female, age 67, right hemisphere 36.7
Perirhinal gyrus
nTPM: 61.5
1794 Male, age 80, right hemisphere 67.7
1847 Female, age 91, left hemisphere 66.6
1841 Female, age 85, right hemisphere 64.1
2521 Female, age 94, right hemisphere 57.6
2848 Male, age 76, right hemisphere 51.4
Subiculum
nTPM: 47.6
1977 Female, age 85, both hemispheres 54.9
2438 Female, age 94, left hemisphere 53.6
1901 Male, age 80, both hemispheres 51.6
2619 Male, age 74, both hemispheres 48.5
2042 Male, age 76, both hemispheres 43.5
2729 Female, age 91, right hemisphere 33.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 132.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 132.6
Samples: 255

Max nTPM: 246.2
Min nTPM: 82.5
Std nTPM: 23.5
Median nTPM: 128.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 246.2
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 219.2
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 216.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 209.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 202.3
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 199.0
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 190.6
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 183.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 179.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 177.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 177.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 115.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.4
FF:10169-103B7 60 years, female 121.5
FF:10153-102I9 76 years, female 109.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 100.9
Pig sample Sample description nTPM
Subiculum
nTPM: 95.4
Samples: 4

Max nTPM: 131.6
Min nTPM: 75.8
Sample A Female 131.6
Sample B Female 93.0
Sample C Male 81.3
Sample D Male 75.8
Dorsal hippocampus
nTPM: 99.0
Samples: 4

Max nTPM: 127.1
Min nTPM: 67.7
Sample A Female 127.1
Sample B Female 87.8
Sample C Male 113.2
Sample D Male 67.7
Entorhinal cortex
nTPM: 100.9
Samples: 4

Max nTPM: 119.2
Min nTPM: 80.7
Sample A Female 102.7
Sample B Female 119.2
Sample C Male 100.9
Sample D Male 80.7
Ventral hippocampus
nTPM: 91.4
Samples: 4

Max nTPM: 109.2
Min nTPM: 72.1
Sample A Female 88.6
Sample B Female 72.1
Sample C Male 109.2
Sample D Male 95.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 222.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 222.7
Samples: 4

Max nTPM: 228.9
Min nTPM: 216.9
Sample A Male 216.9
Sample B Male 219.5
Sample C Female 228.9
Sample D Female 225.3
Hippocampal formation
nTPM: 210.7
Samples: 4

Max nTPM: 222.7
Min nTPM: 198.9
Sample A Male 222.7
Sample B Male 198.9
Sample C Female 214.8
Sample D Female 206.3

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