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  • TISSUE

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  • PSMC5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:145.0 nTPM
HPA Brain:69.6 nTPM
GTEx:145.0 nTPM
Pig:144.0 nTPM
Mouse:266.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 66.8
2226 Male, age 75, left hemisphere 82.3
1961 Female, age 42, unknown 51.2
Dorsomedial nucleus
nTPM: 58.0
1989 Male, age 62, unknown 65.1
2041 Female, age 72, unknown 62.2
2017 Female, age 42, unknown 46.5
Lateral hypothalamic area
nTPM: 69.6
1791 Male, age 80, right hemisphere 77.6
2271 Male, age 75, both hemispheres 72.4
2228 Male, age 66, unknown 72.2
2412 Male, age 62, unknown 56.2
Mammillary body
nTPM: 69.5
1923 Female, age 72, unknown 90.3
1948 Female, age 72, unknown 69.6
2413 Male, age 66, unknown 69.2
1945 Male, age 80, right hemisphere 62.6
1834 Female, age 42, unknown 56.0
Paraventricular nucleus
nTPM: 64.4
2700 Male, age 62, unknown 64.4
Preoptic area
nTPM: 62.3
1861 Female, age 42, unknown 63.7
1907 Male, age 80, right hemisphere 63.4
2414 Female, age 72, unknown 59.9
Supraoptic nucleus
nTPM: 63.9
2835 Female, age 72, unknown 64.2
1894 Female, age 72, unknown 63.9
2043 Male, age 62, unknown 63.7
Ventromedial nucleus
nTPM: 57.5
1982 Female, age 72, unknown 64.8
1822 Female, age 42, unknown 50.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 145.0
Samples: 257

Max nTPM: 316.4
Min nTPM: 82.1
Std nTPM: 26.5
Median nTPM: 142.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 316.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 220.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 216.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 213.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 212.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 209.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 205.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 204.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 202.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 194.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 193.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 191.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 188.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 188.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 186.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 186.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 183.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 182.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 182.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 182.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 178.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 176.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 176.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 175.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 175.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 175.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 174.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 173.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 173.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 172.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 172.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 171.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 170.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 170.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 170.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 168.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 168.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 168.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 167.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 167.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 167.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 166.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 166.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 166.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 166.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 166.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 166.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 166.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 166.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 165.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 165.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 164.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 163.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 163.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 162.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 162.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 162.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 162.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 161.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 160.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 160.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 160.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 159.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 159.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 159.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 159.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 159.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 158.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 158.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 158.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 158.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 158.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 157.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 157.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 156.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 156.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 156.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 156.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 155.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 154.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 154.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 153.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 153.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 153.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 152.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 152.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 152.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 152.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 151.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 151.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 151.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 151.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 151.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 151.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 151.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 150.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 150.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 149.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 149.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 149.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 149.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 149.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 149.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 149.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 148.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 148.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 148.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 148.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 147.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 147.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 147.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 147.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 146.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 146.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 146.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 145.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 145.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 144.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 144.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 144.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 144.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 144.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 143.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 143.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 143.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 143.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 143.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 142.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 142.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 142.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 142.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 142.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 142.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 141.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 141.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 141.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 141.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 140.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 140.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 139.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 139.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 139.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 139.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 138.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 138.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 138.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 138.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 137.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 137.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 136.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 136.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 136.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 135.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 135.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 135.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 135.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 135.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 134.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 134.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 134.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 134.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 134.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 134.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 134.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 133.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 133.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 133.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 133.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 133.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 133.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 133.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 132.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 132.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 131.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 131.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 131.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 131.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 131.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 131.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 131.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 130.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 129.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 128.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 128.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 128.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 128.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 128.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 128.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 127.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 127.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 127.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 127.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 127.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 127.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 127.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 127.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 126.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 126.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 125.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 125.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 125.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 125.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 124.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 124.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 123.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 123.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 122.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 122.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 122.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 121.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 121.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 121.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 121.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 121.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 120.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 120.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 120.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 120.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 120.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 119.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 119.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 119.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 119.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 119.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 119.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 118.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 118.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 118.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 117.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 117.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 117.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 117.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 116.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 115.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 115.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 114.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 113.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 113.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 112.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 112.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 111.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 110.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 109.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 109.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 109.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 109.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 107.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 107.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 105.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 103.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 102.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 99.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 97.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 96.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 87.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 85.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 82.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

144.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 144.0
Samples: 4

Max nTPM: 192.7
Min nTPM: 104.9
Sample A Female 192.7
Sample B Female 143.7
Sample C Male 134.6
Sample D Male 104.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

266.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 266.9
Samples: 4

Max nTPM: 296.5
Min nTPM: 246.4
Sample A Male 246.4
Sample B Male 296.5
Sample C Female 267.4
Sample D Female 257.1

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