HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:87.2 nTPM
HPA Brain:194.7 nTPM
GTEx:87.2 nTPM
FANTOM5:131.2 Scaled Tags Per Million
Pig:145.8 nTPM
Mouse:261.6 nTPM
Allen mouse:17.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035873Antibody HPA035874Antibody CAB009794
Glial cells MediumNot detectedLow
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 194.7
Sample id Sample description nTPM
Hippocampus
nTPM: 189.0
2529 Female, age 94, left hemisphere 227.0
2621 Female, age 67, right hemisphere 191.8
1855 Male, age 76, left hemisphere 187.5
1898 Male, age 80, left hemisphere 183.8
2148 Female, age 91, left hemisphere 179.3
1911 Female, age 85, right hemisphere 164.8
Dentate gyrus
nTPM: 168.1
2530 Female, age 94, left hemisphere 189.0
2531 Female, age 67, both hemispheres 177.5
2010 Male, age 76, both hemispheres 165.9
2246 Female, age 85, both hemispheres 163.8
1927 Female, age 91, both hemispheres 159.2
2528 Male, age 74, both hemispheres 153.4
Entorhinal gyrus
nTPM: 189.7
2117 Female, age 91, right hemisphere 205.5
2764 Male, age 80, right hemisphere 201.3
2613 Female, age 94, left hemisphere 188.5
1787 Male, age 76, left hemisphere 188.0
1938 Female, age 85, left hemisphere 187.3
2686 Male, age 75, right hemisphere 167.6
Hippocampus, CA1
nTPM: 178.0
2749 Male, age 80, left hemisphere 199.3
2527 Male, age 74, both hemispheres 187.1
1873 Female, age 85, both hemispheres 174.3
2045 Male, age 76, both hemispheres 173.6
2082 Female, age 91, right hemisphere 155.9
Hippocampus, CA2
nTPM: 169.4
2437 Female, age 94, left hemisphere 196.3
1892 Male, age 76, both hemispheres 182.9
1963 Male, age 80, left hemisphere 168.2
1940 Female, age 85, left hemisphere 165.5
2113 Female, age 91, right hemisphere 159.6
2249 Male, age 74, both hemispheres 144.0
Hippocampus, CA3
nTPM: 186.2
2620 Female, age 94, left hemisphere 216.0
2861 Female, age 67, both hemispheres 207.7
2137 Male, age 80, left hemisphere 195.4
1867 Male, age 76, both hemispheres 178.0
1891 Female, age 85, both hemispheres 175.2
2436 Male, age 74, both hemispheres 144.8
Parahippocampal cortex
nTPM: 181.6
2245 Female, age 91, both hemispheres 210.4
2692 Male, age 74, both hemispheres 207.9
2532 Female, age 72, left hemisphere 205.4
1850 Male, age 80, both hemispheres 194.2
2622 Female, age 67, right hemisphere 187.0
1990 Female, age 91, right hemisphere 178.0
2250 Female, age 67, right hemisphere 165.4
1933 Female, age 85, both hemispheres 164.1
2693 Female, age 94, both hemispheres 154.5
2018 Male, age 76, both hemispheres 148.8
Perirhinal gyrus
nTPM: 185.2
1794 Male, age 80, right hemisphere 210.8
1847 Female, age 91, left hemisphere 184.7
1841 Female, age 85, right hemisphere 178.7
2848 Male, age 76, right hemisphere 176.3
2521 Female, age 94, right hemisphere 175.4
Subiculum
nTPM: 194.7
2438 Female, age 94, left hemisphere 267.4
1901 Male, age 80, both hemispheres 200.5
2619 Male, age 74, both hemispheres 200.2
1977 Female, age 85, both hemispheres 175.9
2042 Male, age 76, both hemispheres 168.8
2729 Female, age 91, right hemisphere 155.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 87.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.2
Samples: 255

Max nTPM: 161.2
Min nTPM: 52.7
Std nTPM: 14.7
Median nTPM: 85.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 161.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 126.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 126.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 123.6
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 122.9
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 120.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 117.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 116.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 116.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 116.2
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 116.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 131.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.2
FF:10153-102I9 76 years, female 141.9
FF:10169-103B7 60 years, female 120.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 145.8
Pig sample Sample description nTPM
Subiculum
nTPM: 139.3
Samples: 4

Max nTPM: 178.1
Min nTPM: 110.0
Sample A Female 178.1
Sample B Female 131.6
Sample C Male 137.6
Sample D Male 110.0
Dorsal hippocampus
nTPM: 134.3
Samples: 4

Max nTPM: 160.6
Min nTPM: 99.5
Sample A Female 160.6
Sample B Female 147.7
Sample C Male 129.2
Sample D Male 99.5
Entorhinal cortex
nTPM: 145.8
Samples: 4

Max nTPM: 166.1
Min nTPM: 123.9
Sample A Female 150.0
Sample B Female 143.2
Sample C Male 166.1
Sample D Male 123.9
Ventral hippocampus
nTPM: 142.7
Samples: 4

Max nTPM: 183.4
Min nTPM: 106.7
Sample A Female 119.6
Sample B Female 106.7
Sample C Male 183.4
Sample D Male 160.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 261.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 240.9
Samples: 4

Max nTPM: 255.0
Min nTPM: 230.6
Sample A Male 237.1
Sample B Male 240.8
Sample C Female 230.6
Sample D Female 255.0
Hippocampal formation
nTPM: 261.6
Samples: 4

Max nTPM: 285.8
Min nTPM: 245.4
Sample A Male 249.9
Sample B Male 265.4
Sample C Female 285.8
Sample D Female 245.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
68631935 Antisense, RP_050125_01_D06, Mouse strain C57BL/6J (56 days, male) 17.4

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