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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:75.8 nTPM
HPA Brain:175.3 nTPM
GTEx:75.8 nTPM
Pig:105.4 nTPM
Mouse:170.8 nTPM
Allen mouse:10.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

175.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 152.1
2226 Male, age 75, left hemisphere 155.2
1961 Female, age 42, unknown 148.9
Dorsomedial nucleus
nTPM: 158.0
1989 Male, age 62, unknown 171.9
2041 Female, age 72, unknown 154.5
2017 Female, age 42, unknown 147.6
Lateral hypothalamic area
nTPM: 148.9
1791 Male, age 80, right hemisphere 170.3
2271 Male, age 75, both hemispheres 157.4
2412 Male, age 62, unknown 139.8
2228 Male, age 66, unknown 128.1
Mammillary body
nTPM: 175.3
2413 Male, age 66, unknown 189.4
1948 Female, age 72, unknown 175.7
1945 Male, age 80, right hemisphere 174.9
1834 Female, age 42, unknown 172.8
1923 Female, age 72, unknown 163.7
Paraventricular nucleus
nTPM: 174.7
2700 Male, age 62, unknown 174.7
Preoptic area
nTPM: 167.2
2414 Female, age 72, unknown 184.0
1861 Female, age 42, unknown 175.8
1907 Male, age 80, right hemisphere 141.7
Supraoptic nucleus
nTPM: 154.7
2835 Female, age 72, unknown 176.8
2043 Male, age 62, unknown 156.6
1894 Female, age 72, unknown 130.7
Ventromedial nucleus
nTPM: 152.6
1982 Female, age 72, unknown 164.4
1822 Female, age 42, unknown 140.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 75.8
Samples: 257

Max nTPM: 118.6
Min nTPM: 49.1
Std nTPM: 11.1
Median nTPM: 73.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 118.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 117.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 109.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 107.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 107.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 105.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 103.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 102.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 102.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 101.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 101.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 98.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 96.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 96.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 95.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 94.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 93.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 93.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 93.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 92.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 92.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 92.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 91.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 89.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 89.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 89.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 89.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 89.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 89.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 88.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 88.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 88.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 88.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 87.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 87.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 87.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 87.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 86.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 85.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 85.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 84.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 84.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 84.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 84.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 84.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 84.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 84.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 84.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 84.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 83.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 83.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 83.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 83.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 83.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 83.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 83.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 83.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 82.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 82.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 82.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 82.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 82.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 81.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 81.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 81.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 81.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 81.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 81.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 81.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 81.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 80.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 80.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 80.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 80.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 80.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 80.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 80.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 80.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 79.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 79.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 79.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 79.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 79.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 79.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 78.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 78.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 78.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 78.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 78.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 78.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 78.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 78.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 78.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 78.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 78.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 78.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 78.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 77.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 77.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 77.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 77.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 77.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 77.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 77.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 77.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 77.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 77.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 76.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 76.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 76.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 76.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 75.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 75.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 75.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 75.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 75.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 75.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 75.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 75.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 74.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 74.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 74.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 74.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 74.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 74.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 73.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 73.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 73.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 73.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 73.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 73.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 73.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 73.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 73.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 73.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 73.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 72.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 72.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 72.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 72.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 72.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 72.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 72.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 72.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 72.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 72.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 72.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 72.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 72.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 72.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 72.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 72.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 72.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 72.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 72.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 72.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 71.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 71.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 71.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 71.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 71.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 71.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 71.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 71.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 71.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 70.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 70.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 70.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 70.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 70.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 70.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 70.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 70.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 70.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 70.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 70.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 69.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 69.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 69.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 69.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 69.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 69.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 69.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 69.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 69.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 69.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 69.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 69.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 69.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 68.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 68.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 68.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 68.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 68.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 68.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 68.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 68.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 68.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 68.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 67.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 67.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 67.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 67.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 67.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 67.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 67.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 67.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 66.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 66.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 66.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 66.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 66.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 65.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 65.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 65.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 65.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 65.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 64.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 64.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 64.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 64.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 64.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 64.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 64.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 64.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 64.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 64.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 64.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 63.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 62.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 62.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 62.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 62.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 62.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 62.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 62.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 61.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 61.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 61.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 61.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 61.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 61.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 60.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 60.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 60.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 60.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 60.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 59.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 59.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 59.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 58.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 57.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 55.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 55.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 55.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 54.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 49.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 105.4
Samples: 4

Max nTPM: 130.7
Min nTPM: 73.0
Sample A Female 130.7
Sample B Female 114.5
Sample C Male 103.5
Sample D Male 73.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 170.8
Samples: 4

Max nTPM: 177.4
Min nTPM: 161.2
Sample A Male 161.2
Sample B Male 167.7
Sample C Female 177.4
Sample D Female 177.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.9
68631935 Antisense, RP_050125_01_D06, Mouse strain C57BL/6J (56 days, male) 10.9

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