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  • TISSUE

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  • SF3B2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:93.5 nTPM
HPA Brain:112.1 nTPM
GTEx:93.5 nTPM
Pig:73.9 nTPM
Mouse:127.6 nTPM
Allen mouse:9.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 101.0
2226 Male, age 75, left hemisphere 103.2
1961 Female, age 42, unknown 98.8
Dorsomedial nucleus
nTPM: 112.1
2041 Female, age 72, unknown 118.9
1989 Male, age 62, unknown 116.1
2017 Female, age 42, unknown 101.2
Lateral hypothalamic area
nTPM: 98.2
1791 Male, age 80, right hemisphere 114.9
2228 Male, age 66, unknown 100.6
2271 Male, age 75, both hemispheres 93.6
2412 Male, age 62, unknown 83.7
Mammillary body
nTPM: 108.7
1945 Male, age 80, right hemisphere 115.2
1923 Female, age 72, unknown 113.7
1834 Female, age 42, unknown 107.7
2413 Male, age 66, unknown 106.2
1948 Female, age 72, unknown 100.8
Paraventricular nucleus
nTPM: 97.4
2700 Male, age 62, unknown 97.4
Preoptic area
nTPM: 100.9
1861 Female, age 42, unknown 101.7
1907 Male, age 80, right hemisphere 100.6
2414 Female, age 72, unknown 100.3
Supraoptic nucleus
nTPM: 108.5
2043 Male, age 62, unknown 113.5
1894 Female, age 72, unknown 106.0
2835 Female, age 72, unknown 106.0
Ventromedial nucleus
nTPM: 100.5
1982 Female, age 72, unknown 102.7
1822 Female, age 42, unknown 98.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 93.5
Samples: 257

Max nTPM: 183.5
Min nTPM: 54.6
Std nTPM: 15.7
Median nTPM: 91.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 183.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 170.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 151.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 148.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 138.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 134.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 129.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 128.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 123.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 123.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 122.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 118.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 118.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 117.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 117.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 117.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 116.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 116.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 115.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 114.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 114.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 114.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 113.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 113.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 112.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 112.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 111.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 111.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 110.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 109.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 108.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 108.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 107.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 107.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 107.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 107.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 107.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 107.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 106.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 106.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 106.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 105.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 105.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 105.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 105.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 104.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 104.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 104.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 104.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 104.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 104.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 104.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 103.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 102.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 102.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 101.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 101.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 101.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 101.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 101.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 100.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 100.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 99.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 99.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 99.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 99.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 99.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 99.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 98.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 98.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 98.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 98.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 98.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 98.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 98.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 98.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 98.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 98.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 97.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 97.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 97.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 97.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 97.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 96.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 96.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 96.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 96.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 96.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 95.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 95.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 95.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 95.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 95.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 95.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 95.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 95.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 95.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 94.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 94.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 94.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 94.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 94.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 94.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 94.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 94.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 93.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 93.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 93.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 93.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 92.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 92.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 92.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 92.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 92.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 92.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 92.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 92.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 92.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 92.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 92.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 92.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 92.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 91.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 91.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 91.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 91.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 91.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 91.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 91.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 91.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 90.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 90.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 90.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 90.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 90.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 90.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 89.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 89.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 89.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 89.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 89.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 89.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 89.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 89.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 89.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 89.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 88.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 88.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 88.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 88.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 88.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 88.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 88.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 88.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 87.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 87.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 87.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 87.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 87.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 87.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 87.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 87.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 87.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 87.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 86.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 86.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 86.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 86.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 86.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 86.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 86.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 85.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 85.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 85.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 85.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 85.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 85.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 85.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 85.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 85.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 85.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 84.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 84.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 84.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 84.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 84.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 84.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 84.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 84.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 84.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 84.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 84.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 84.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 83.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 83.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 83.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 83.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 83.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 83.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 83.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 82.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 82.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 82.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 82.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 82.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 82.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 82.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 82.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 82.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 81.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 81.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 81.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 81.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 81.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 81.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 81.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 81.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 81.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 80.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 80.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 80.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 79.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 79.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 79.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 79.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 79.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 79.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 79.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 78.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 78.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 78.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 78.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 78.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 78.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 78.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 77.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 77.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 77.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 77.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 76.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 76.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 76.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 75.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 75.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 74.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 73.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 73.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 73.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 70.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 70.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 70.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 69.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 68.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 64.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 63.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 55.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 54.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 73.9
Samples: 4

Max nTPM: 88.5
Min nTPM: 59.3
Sample A Female 88.5
Sample B Female 71.5
Sample C Male 76.1
Sample D Male 59.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 127.6
Samples: 4

Max nTPM: 133.3
Min nTPM: 122.5
Sample A Male 133.3
Sample B Male 131.7
Sample C Female 122.5
Sample D Female 122.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.7
74988735 Antisense, RP_060315_04_B03, Mouse strain C57BL/6J (56 days, male) 11.6
70593345 Antisense, RP_050407_04_A05, Mouse strain C57BL/6J (56 days, male) 7.7

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