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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
89.6
nTPM
HPA Brain:
81.3
nTPM
GTEx:
89.6
nTPM
FANTOM5:
103.5
Scaled Tags Per Million
Mouse:
268.3
nTPM
Allen mouse:
9.2
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
81.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 64.0
2666
Male, age 74, left hemisphere
102.9
2019
Male, age 18, unknown
80.7
1827
Male, age 72, unknown
72.1
2828
Female, age 72, unknown
60.8
2586
Male, age 75, left hemisphere
60.2
1870
Female, age 42, unknown
59.9
2411
Female, age 72, unknown
58.5
1830
Male, age 51, unknown
50.7
1833
Male, age 53, unknown
48.4
2219
Male, age 76, both hemispheres
45.6
Dorsal raphe nucleus nTPM: 51.7
2750
Male, age 76, both hemispheres
59.1
2298
Female, age 72, unknown
57.2
2047
Male, age 72, unknown
52.2
1828
Male, age 53, unknown
49.5
2016
Female, age 72, unknown
40.3
Inferior colliculus nTPM: 52.7
2097
Female, age 72, unknown
58.9
1890
Male, age 53, unknown
52.8
2849
Male, age 72, unknown
51.8
1848
Female, age 42, unknown
47.3
Median raphe nucleus nTPM: 57.0
2220
Male, age 76, midline
57.0
Periaquaductal grey, anterior nTPM: 66.8
1795
Male, age 51, unknown
78.0
2502
Female, age 75, unknown
73.5
1947
Male, age 18, unknown
48.8
Periaquaductal grey, dorsal nTPM: 59.2
1831
Male, age 72, unknown
70.7
1840
Male, age 53, unknown
62.8
2850
Male, age 76, both hemispheres
54.8
2464
Female, age 72, unknown
48.5
Periaquaductal grey, lateral nTPM: 56.6
2272
Male, age 74, both hemispheres
67.3
2053
Male, age 18, unknown
56.7
2140
Male, age 76, both hemispheres
45.8
Pretectal area nTPM: 81.3
1816
Male, age 51, unknown
128.2
1817
Female, age 42, unknown
115.3
1815
Male, age 53, unknown
109.6
1944
Female, age 72, unknown
100.5
2007
Male, age 72, unknown
99.2
2407
Male, age 75, both hemispheres
65.9
2224
Female, age 72, unknown
63.7
2273
Male, age 74, both hemispheres
58.2
2667
Female, age 75, unknown
58.1
2825
Male, age 18, unknown
54.3
2316
Male, age 76, right hemisphere
41.2
Red nucleus nTPM: 55.3
2584
Male, age 75, left hemisphere
81.9
2785
Male, age 18, unknown
74.0
2725
Female, age 75, unknown
65.5
2588
Male, age 74, left hemisphere
62.5
2823
Male, age 76, right hemisphere
54.9
1821
Female, age 72, unknown
49.5
1904
Male, age 53, unknown
49.4
2503
Female, age 72, unknown
48.2
1865
Male, age 51, unknown
47.7
1954
Female, age 42, unknown
44.8
2769
Male, age 72, unknown
44.8
2227
Male, age 72, unknown
40.8
Substantia nigra nTPM: 63.8
2665
Male, age 74, both hemispheres
91.9
1889
Female, age 72, unknown
81.0
2409
Female, age 72, unknown
75.1
2583
Male, age 75, right hemisphere
68.8
1851
Male, age 51, unknown
62.5
1941
Male, age 53, unknown
56.6
2590
Female, age 75, unknown
51.3
2699
Male, age 18, unknown
51.2
1916
Female, age 42, unknown
50.5
2241
Male, age 72, unknown
49.4
Superior colliculus nTPM: 69.6
2261
Male, age 18, unknown
86.8
2087
Female, age 72, unknown
83.3
1913
Female, age 42, unknown
80.4
2668
Female, age 75, unknown
79.9
1995
Male, age 72, unknown
75.1
1796
Male, age 53, unknown
72.3
2587
Male, age 74, left hemisphere
65.7
2664
Male, age 75, both hemispheres
55.1
1839
Male, age 51, unknown
54.3
1895
Male, age 76, right hemisphere
42.8
Ventral tegmental area nTPM: 60.2
2223
Female, age 72, unknown
85.7
2021
Male, age 53, unknown
57.9
2410
Female, age 72, unknown
57.9
2218
Male, age 76, both hemispheres
57.4
1942
Male, age 51, unknown
51.3
1915
Female, age 42, unknown
51.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
89.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 89.6
Samples: 139
Max nTPM: 208.6
Min nTPM: 51.5
Std nTPM: 28.2
Median nTPM: 82.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
208.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
197.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
174.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
164.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
157.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
157.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
150.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
149.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
147.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
145.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
132.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
130.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
130.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
129.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
129.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
125.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
124.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
119.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
119.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
117.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
114.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
112.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
110.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
108.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
105.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
104.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
104.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
102.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
102.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
102.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
102.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
101.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
101.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
99.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
99.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
99.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
99.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
98.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
97.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
95.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
95.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
94.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
94.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
94.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
93.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
93.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
93.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
92.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
91.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
90.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
89.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
89.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
89.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
87.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
87.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
87.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
87.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
86.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
85.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
85.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
85.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
84.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
84.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
84.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
84.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
83.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
83.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
82.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
82.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
82.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
82.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
82.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
81.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
81.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
81.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
80.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
80.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
80.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
80.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
79.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
79.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
79.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
79.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
79.0
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
78.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
78.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
77.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
77.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
77.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
77.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
77.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
77.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
77.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
77.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
76.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
76.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
75.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
74.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
74.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
73.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
72.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
72.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
72.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
71.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
71.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
71.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
70.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
70.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
70.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
69.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
69.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
66.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
65.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
64.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
63.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
63.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
63.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
63.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
63.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
62.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
62.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
62.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
62.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
62.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
62.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
62.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
62.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
61.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
60.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
60.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
59.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
59.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
58.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
58.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
58.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
57.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
54.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
54.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
51.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
268.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 268.3
Samples: 4
Max nTPM: 291.4
Min nTPM: 251.3
Sample A
Male
258.4
Sample B
Male
251.3
Sample C
Female
291.4
Sample D
Female
272.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.