PEBP1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • PEBP1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN66 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM10 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:530.3 nTPM
GTEx:896.4 nTPM
FANTOM5:713.6 Scaled Tags Per Million
Macaque:285.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

530.3
Sample id Sample description nTPM
Putamen
nTPM: 530.3
2482 Female, age 94, left hemisphere 617.2
2466 Female, age 79, unknown 603.6
1937 Female, age 91, right hemisphere 592.3
1829 Male, age 74, unknown 533.0
1838 Male, age 80, right hemisphere 524.2
2647 Male, age 75, left hemisphere 443.8
2489 Female, age 72, unknown 398.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

896.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 896.4
Samples: 254

Max nTPM: 1430.3
Min nTPM: 423.4
Std nTPM: 158.6
Median nTPM: 891.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1430.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1410.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1397.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1372.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1338.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1308.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1306.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1232.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1227.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1220.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1203.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1190.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1166.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1150.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1149.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1135.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1126.9
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1117.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1112.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1107.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1104.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1102.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1098.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1094.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1081.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1074.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1054.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1053.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1052.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1051.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1048.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1045.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1044.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1041.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1039.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1035.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1034.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1032.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1029.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1027.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1026.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1026.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1025.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1023.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1020.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1019.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1018.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1014.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1012.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1011.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1011.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1007.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1005.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1005.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1005.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1003.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1003.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1002.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 999.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 999.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 996.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 995.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 993.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 984.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 984.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 984.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 983.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 983.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 980.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 976.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 975.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 975.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 972.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 970.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 969.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 969.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 968.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 963.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 961.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 961.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 958.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 957.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 955.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 954.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 952.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 948.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 947.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 945.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 943.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 940.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 940.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 940.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 938.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 936.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 936.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 936.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 935.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 934.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 931.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 930.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 930.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 929.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 929.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 928.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 928.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 927.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 926.7
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 924.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 924.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 923.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 921.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 918.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 918.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 913.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 912.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 910.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 906.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 905.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 901.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 901.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 899.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 899.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 899.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 898.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 898.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 897.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 897.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 885.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 885.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 884.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 884.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 883.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 881.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 881.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 879.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 879.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 877.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 877.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 877.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 876.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 871.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 870.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 869.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 869.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 867.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 866.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 866.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 864.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 864.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 860.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 860.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 858.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 856.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 855.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 854.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 851.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 850.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 847.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 847.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 844.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 844.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 843.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 842.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 841.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 840.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 839.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 834.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 831.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 831.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 830.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 829.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 826.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 825.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 824.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 820.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 820.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 819.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 819.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 814.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 813.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 812.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 809.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 808.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 808.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 808.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 806.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 802.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 801.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 797.8
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 793.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 792.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 792.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 790.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 788.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 787.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 777.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 776.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 773.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 770.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 770.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 769.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 768.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 768.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 767.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 764.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 763.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 760.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 760.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 752.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 749.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 745.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 743.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 743.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 740.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 740.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 739.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 737.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 736.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 735.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 733.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 731.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 729.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 729.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 729.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 726.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 723.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 722.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 717.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 705.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 704.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 701.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 698.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 697.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 688.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 687.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 687.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 685.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 681.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 678.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 677.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 670.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 663.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 659.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 645.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 628.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 619.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 614.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 603.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 588.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 580.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 548.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 538.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 482.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 423.4
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

713.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 713.6
FF:10176-103C5 60 years, female 713.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

285.9
Macaque sample Sample description nTPM
Putamen
nTPM: 285.9
Samples: 2

Max nTPM: 296.3
Min nTPM: 275.5
Sample A 275.5
Sample B 296.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.