A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
241.7
nTPM
Monaco:
308.8
nTPM
Schmiedel:
210.5
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
241.7
HPA sample
nTPM
Classical monocyte nTPM: 241.8
Samples: 6
Max nTPM: 291.7
Min nTPM: 185.6
P10809_1003
285.3
P10809_1020
258.4
P10809_1039
291.7
P10809_1058
204.5
P10809_1080
185.6
P10809_1107
225.0
Intermediate monocyte nTPM: 179.0
Samples: 6
Max nTPM: 220.5
Min nTPM: 141.5
P10809_1004
141.5
P10809_1023
201.2
P10809_1042
220.5
P10809_1061
179.1
P10809_1081
157.8
P10809_1108
173.8
Non-classical monocyte nTPM: 171.6
Samples: 5
Max nTPM: 197.0
Min nTPM: 151.6
P10809_1005
151.6
P10809_1053
197.0
P10809_1072
167.1
P10809_1082
158.0
P10809_1109
184.3
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
308.8
Monaco sample
nTPM
Classical monocyte nTPM: 308.8
Samples: 4
Max nTPM: 375.0
Min nTPM: 214.1
RHH5313_R3680
304.0
RHH5221_R3593
214.1
RHH5250_R3622
375.0
RHH5279_R3651
342.0
Intermediate monocyte nTPM: 213.9
Samples: 4
Max nTPM: 285.6
Min nTPM: 135.1
RHH5314_R3681
285.6
RHH5222_R3594
135.1
RHH5251_R3623
175.2
RHH5280_R3652
259.8
Non-classical monocyte nTPM: 163.0
Samples: 4
Max nTPM: 229.6
Min nTPM: 97.2
RHH5315_R3682
195.1
RHH5223_R3595
97.2
RHH5252_R3624
130.2
RHH5281_R3653
229.6
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
210.5
Schmiedel sample id
TPM
Classical monocyte TPM: 210.5
Samples: 91
Max TPM: 252.1
Min TPM: 153.1
MONOCYTES_1
252.1
MONOCYTES_2
248.7
MONOCYTES_3
246.8
MONOCYTES_4
246.3
MONOCYTES_5
246.1
MONOCYTES_6
245.9
MONOCYTES_7
245.4
MONOCYTES_8
242.0
MONOCYTES_9
241.4
MONOCYTES_10
238.8
MONOCYTES_11
238.6
MONOCYTES_12
238.0
MONOCYTES_13
237.5
MONOCYTES_14
233.7
MONOCYTES_15
231.8
MONOCYTES_16
229.1
MONOCYTES_17
228.6
MONOCYTES_18
228.3
MONOCYTES_19
227.1
MONOCYTES_20
226.1
MONOCYTES_21
226.0
MONOCYTES_22
225.1
MONOCYTES_23
224.6
MONOCYTES_24
222.5
MONOCYTES_25
221.7
MONOCYTES_26
221.4
MONOCYTES_27
221.0
MONOCYTES_28
220.9
MONOCYTES_29
220.8
MONOCYTES_30
219.7
MONOCYTES_31
219.5
MONOCYTES_32
219.5
MONOCYTES_33
218.6
MONOCYTES_34
218.1
MONOCYTES_35
216.5
MONOCYTES_36
215.7
MONOCYTES_37
215.2
MONOCYTES_38
214.6
MONOCYTES_39
213.4
MONOCYTES_40
212.0
MONOCYTES_41
211.7
MONOCYTES_42
211.2
MONOCYTES_43
209.7
MONOCYTES_44
209.5
MONOCYTES_45
209.2
MONOCYTES_46
208.6
MONOCYTES_47
208.5
MONOCYTES_48
208.3
MONOCYTES_49
208.2
MONOCYTES_50
207.8
MONOCYTES_51
207.7
MONOCYTES_52
207.3
MONOCYTES_53
206.8
MONOCYTES_54
205.8
MONOCYTES_55
205.1
MONOCYTES_56
204.3
MONOCYTES_57
203.1
MONOCYTES_58
202.2
MONOCYTES_59
202.2
MONOCYTES_60
200.7
MONOCYTES_61
200.6
MONOCYTES_62
199.1
MONOCYTES_63
198.7
MONOCYTES_64
198.2
MONOCYTES_65
197.8
MONOCYTES_66
197.2
MONOCYTES_67
196.6
MONOCYTES_68
195.8
MONOCYTES_69
195.4
MONOCYTES_70
195.2
MONOCYTES_71
194.5
MONOCYTES_72
194.2
MONOCYTES_73
193.8
MONOCYTES_74
193.8
MONOCYTES_75
193.2
MONOCYTES_76
192.9
MONOCYTES_77
192.7
MONOCYTES_78
192.1
MONOCYTES_79
192.1
MONOCYTES_80
191.7
MONOCYTES_81
190.7
MONOCYTES_82
189.2
MONOCYTES_83
187.1
MONOCYTES_84
181.9
MONOCYTES_85
181.3
MONOCYTES_86
180.6
MONOCYTES_87
179.0
MONOCYTES_88
178.2
MONOCYTES_89
170.7
MONOCYTES_90
165.0
MONOCYTES_91
153.1
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Non-classical monocyte TPM: 131.8
Samples: 90
Max TPM: 183.0
Min TPM: 93.1
M2_1
183.0
M2_2
163.2
M2_3
160.4
M2_4
159.6
M2_5
159.2
M2_6
157.7
M2_7
153.6
M2_8
153.4
M2_9
150.7
M2_10
149.2
M2_11
147.7
M2_12
147.5
M2_13
146.8
M2_14
146.8
M2_15
146.7
M2_16
146.4
M2_17
146.1
M2_18
145.4
M2_19
143.9
M2_20
143.2
M2_21
143.1
M2_22
142.4
M2_23
141.9
M2_24
141.9
M2_25
141.2
M2_26
140.2
M2_27
138.6
M2_28
138.5
M2_29
138.2
M2_30
137.7
M2_31
136.4
M2_32
136.3
M2_33
136.1
M2_34
136.0
M2_35
135.7
M2_36
135.5
M2_37
134.8
M2_38
134.5
M2_39
134.4
M2_40
133.6
M2_41
133.0
M2_42
132.5
M2_43
132.0
M2_44
132.0
M2_45
131.8
M2_46
131.2
M2_47
131.0
M2_48
130.4
M2_49
130.2
M2_50
129.6
M2_51
129.6
M2_52
129.2
M2_53
128.5
M2_54
128.0
M2_55
127.7
M2_56
127.4
M2_57
127.2
M2_58
127.1
M2_59
126.5
M2_60
126.0
M2_61
125.7
M2_62
125.5
M2_63
125.5
M2_64
122.1
M2_65
121.9
M2_66
121.6
M2_67
121.3
M2_68
121.3
M2_69
121.2
M2_70
120.7
M2_71
120.6
M2_72
120.3
M2_73
119.3
M2_74
119.2
M2_75
118.6
M2_76
118.0
M2_77
117.8
M2_78
116.6
M2_79
116.0
M2_80
114.9
M2_81
114.3
M2_82
113.0
M2_83
110.0
M2_84
107.4
M2_85
107.2
M2_86
104.5
M2_87
104.4
M2_88
103.1
M2_89
94.9
M2_90
93.1
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