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  • SUMMARY

  • TISSUE

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  • CDIP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:112.1 nTPM
HPA Brain:97.2 nTPM
GTEx:112.1 nTPM
Pig:117.7 nTPM
Mouse:234.2 nTPM
Allen mouse:19.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 78.6
1961 Female, age 42, unknown 78.7
2226 Male, age 75, left hemisphere 78.4
Dorsomedial nucleus
nTPM: 95.2
1989 Male, age 62, unknown 121.7
2041 Female, age 72, unknown 84.8
2017 Female, age 42, unknown 79.1
Lateral hypothalamic area
nTPM: 97.2
1791 Male, age 80, right hemisphere 109.7
2412 Male, age 62, unknown 94.4
2271 Male, age 75, both hemispheres 93.4
2228 Male, age 66, unknown 91.2
Mammillary body
nTPM: 89.7
1923 Female, age 72, unknown 106.6
2413 Male, age 66, unknown 97.1
1834 Female, age 42, unknown 85.0
1948 Female, age 72, unknown 84.9
1945 Male, age 80, right hemisphere 75.0
Paraventricular nucleus
nTPM: 93.4
2700 Male, age 62, unknown 93.4
Preoptic area
nTPM: 85.5
1907 Male, age 80, right hemisphere 90.7
1861 Female, age 42, unknown 84.9
2414 Female, age 72, unknown 80.9
Supraoptic nucleus
nTPM: 85.4
2835 Female, age 72, unknown 105.6
1894 Female, age 72, unknown 79.1
2043 Male, age 62, unknown 71.6
Ventromedial nucleus
nTPM: 85.2
1982 Female, age 72, unknown 90.6
1822 Female, age 42, unknown 79.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 112.1
Samples: 257

Max nTPM: 202.8
Min nTPM: 51.0
Std nTPM: 28.4
Median nTPM: 109.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 202.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 198.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 185.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 184.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 183.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 183.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 181.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 180.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 176.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 171.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 170.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 162.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 159.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 159.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 158.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 157.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 155.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 153.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 153.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 151.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 151.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 148.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 148.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 147.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 147.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 147.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 146.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 144.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 144.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 144.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 144.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 144.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 144.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 144.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 142.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 142.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 142.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 141.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 141.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 139.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 139.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 138.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 138.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 137.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 137.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 135.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 135.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 135.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 135.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 134.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 134.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 134.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 133.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 132.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 132.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 132.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 132.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 131.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 131.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 130.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 130.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 129.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 129.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 129.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 129.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 129.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 129.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 128.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 128.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 128.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 128.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 127.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 127.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 127.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 127.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 127.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 127.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 126.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 126.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 126.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 126.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 125.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 125.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 124.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 124.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 124.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 123.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 123.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 123.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 122.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 122.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 121.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 121.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 121.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 120.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 120.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 120.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 120.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 120.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 119.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 119.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 118.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 118.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 117.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 117.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 117.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 117.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 117.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 117.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 116.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 116.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 116.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 115.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 115.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 114.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 113.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 113.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 112.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 112.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 111.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 111.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 110.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 110.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 110.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 110.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 110.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 109.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 109.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 109.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 109.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 109.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 109.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 109.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 108.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 108.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 108.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 108.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 107.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 107.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 107.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 107.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 107.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 106.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 106.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 105.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 105.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 105.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 104.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 104.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 104.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 104.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 104.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 103.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 103.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 103.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 103.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 102.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 102.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 101.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 101.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 101.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 100.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 99.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 99.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 99.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 98.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 98.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 98.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 98.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 98.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 98.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 98.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 98.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 97.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 97.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 97.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 96.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 96.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 96.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 96.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 95.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 95.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 95.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 95.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 94.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 94.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 94.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 94.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 94.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 93.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 93.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 93.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 93.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 93.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 92.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 92.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 91.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 91.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 91.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 90.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 90.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 89.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 89.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 89.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 88.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 87.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 87.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 87.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 87.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 87.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 86.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 86.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 86.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 86.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 86.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 86.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 85.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 85.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 85.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 85.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 84.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 83.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 83.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 82.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 82.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 82.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 81.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 81.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 81.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 80.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 80.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 79.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 78.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 78.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 76.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 74.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 74.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 71.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 70.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 70.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 70.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 68.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 68.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 68.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 67.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 67.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 66.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 62.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 59.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 58.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 56.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 55.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 52.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 52.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 52.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 52.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 51.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 117.7
Samples: 4

Max nTPM: 155.8
Min nTPM: 96.2
Sample A Female 155.8
Sample B Female 113.3
Sample C Male 105.6
Sample D Male 96.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

234.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 234.3
Samples: 4

Max nTPM: 245.9
Min nTPM: 223.1
Sample A Male 223.1
Sample B Male 244.7
Sample C Female 245.9
Sample D Female 223.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 19.2
413811 Antisense, RP_040809_01_F07, Mouse strain C57BL/6J (56 days, male) 19.2

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