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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • MLF2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:176.3 nTPM
GTEx:265.0 nTPM
FANTOM5:197.9 Scaled Tags Per Million
Macaque:149.8 nTPM
Pig:292.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

176.3
Sample id Sample description nTPM
Putamen
nTPM: 176.3
1838 Male, age 80, right hemisphere 232.8
1937 Female, age 91, right hemisphere 208.9
1829 Male, age 74, unknown 189.2
2466 Female, age 79, unknown 187.1
2647 Male, age 75, left hemisphere 148.7
2482 Female, age 94, left hemisphere 143.2
2489 Female, age 72, unknown 124.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

265.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 265.0
Samples: 254

Max nTPM: 435.2
Min nTPM: 136.3
Std nTPM: 71.8
Median nTPM: 261.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 435.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 430.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 423.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 413.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 405.5
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 404.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 402.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 397.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 395.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 395.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 394.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 392.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 392.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 390.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 388.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 382.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 382.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 381.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 380.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 378.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 376.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 376.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 375.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 374.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 372.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 368.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 368.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 368.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 367.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 366.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 361.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 359.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 359.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 357.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 354.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 350.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 350.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 348.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 346.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 345.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 344.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 344.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 344.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 342.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 341.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 338.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 338.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 338.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 334.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 334.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 334.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 333.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 331.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 330.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 327.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 326.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 326.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 325.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 323.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 323.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 322.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 322.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 322.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 320.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 320.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 319.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 318.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 314.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 312.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 312.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 310.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 309.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 308.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 308.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 307.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 307.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 307.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 306.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 305.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 304.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 304.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 304.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 302.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 301.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 295.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 294.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 293.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 293.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 289.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 288.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 288.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 288.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 288.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 288.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 287.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 285.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 284.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 284.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 283.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 283.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 283.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 283.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 282.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 282.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 280.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 279.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 278.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 278.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 278.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 277.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 277.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 276.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 276.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 275.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 273.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 272.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 272.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 271.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 271.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 270.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 270.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 269.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 268.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 265.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 265.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 263.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 263.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 260.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 259.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 258.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 258.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 255.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 253.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 253.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 253.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 253.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 252.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 250.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 248.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 248.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 248.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 247.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 245.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 245.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 244.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 243.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 243.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 241.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 241.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 241.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 240.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 238.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 238.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 238.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 237.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 236.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 233.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 232.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 231.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 230.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 229.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 229.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 226.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 223.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 223.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 222.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 221.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 220.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 216.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 216.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 216.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 216.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 216.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 215.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 215.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 213.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 212.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 212.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 212.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 211.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 211.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 210.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 209.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 207.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 207.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 206.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 206.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 206.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 204.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 204.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 202.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 202.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 200.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 199.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 199.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 198.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 198.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 197.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 196.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 195.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 194.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 194.9
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 194.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 193.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 193.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 192.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 192.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 191.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 189.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 189.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 188.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 188.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 187.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 187.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 186.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 185.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 181.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 181.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 180.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 179.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 178.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 177.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 177.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 176.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 176.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 176.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 175.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 173.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 173.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 172.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 172.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 171.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 170.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 170.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 170.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 168.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 168.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 165.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 163.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 163.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 163.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 162.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 161.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 161.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 161.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 159.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 158.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 157.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 156.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 150.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 149.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 146.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 136.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 136.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

197.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 197.9
FF:10176-103C5 60 years, female 197.9

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

149.8
Macaque sample Sample description nTPM
Putamen
nTPM: 149.8
Samples: 2

Max nTPM: 173.4
Min nTPM: 126.1
Sample A 126.1
Sample B 173.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

292.9
Pig sample Sample description nTPM
Putamen
nTPM: 292.9
Samples: 3

Max nTPM: 346.3
Min nTPM: 231.8
Sample B Female 231.8
Sample C Male 346.3
Sample D Male 300.7

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