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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • MLF2
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:161.1 nTPM
HPA Brain:159.8 nTPM
GTEx:161.1 nTPM
FANTOM5:66.4 Scaled Tags Per Million
Macaque:132.6 nTPM
Mouse:232.4 nTPM
Rat:223.0 nTPM
Pig:256.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 20112
Sample Intensity
Spinal cord_01
15460
Spinal cord_02
13821
Spinal cord_03
27941
Spinal cord_04
27229
Spinal cord_05
24934
Spinal cord_06
16700
Spinal cord_07
16161
Spinal cord_08
23524

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.8
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 155.3
2193 Male, age 75, both hemispheres 182.5
2819 Male, age 47, both hemispheres 182.4
2818 Female, age 79, both hemispheres 138.2
2734 Male, age 80, both hemispheres 118.2
Cervical spinal cord, central gray
nTPM: 135.9
2565 Male, age 75, midline 155.2
1981 Female, age 72, midline 145.8
2194 Female, age 79, both hemispheres 140.8
2816 Male, age 47, midline 124.5
2048 Male, age 55, midline 113.3
Cervical spinal cord, dorsal horn
nTPM: 159.8
2297 Male, age 75, both hemispheres 174.9
2173 Female, age 72, unknown 161.3
2069 Male, age 47, both hemispheres 158.7
2296 Male, age 66, both hemispheres 156.6
1877 Male, age 55, unknown 156.4
2721 Male, age 90, both hemispheres 150.6
Cervical spinal cord, ventral horn
nTPM: 141.4
2295 Male, age 66, both hemispheres 151.5
2098 Female, age 72, unknown 144.3
2480 Male, age 75, both hemispheres 142.9
2820 Female, age 79, both hemispheres 138.1
2068 Male, age 55, unknown 136.8
2809 Male, age 90, both hemispheres 134.9
Dorsal funiculus (white matter)
nTPM: 151.9
2128 Male, age 75, both hemispheres 182.0
2810 Male, age 90, both hemispheres 159.3
2812 Male, age 66, both hemispheres 152.1
2817 Male, age 47, both hemispheres 137.7
2064 Female, age 79, both hemispheres 128.6
Lateral funiculus (white matter)
nTPM: 145.5
2192 Male, age 75, both hemispheres 154.9
2099 Male, age 90, both hemispheres 152.7
2094 Female, age 79, both hemispheres 137.5
2294 Male, age 66, both hemispheres 137.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 161.1
Samples: 204

Max nTPM: 268.6
Min nTPM: 95.7
Std nTPM: 27.2
Median nTPM: 158.9
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 268.6
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 245.1
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 241.0
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 236.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 227.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 225.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 218.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 214.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 213.9
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 212.9
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 207.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 207.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 205.4
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 205.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 203.9
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 203.4
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 203.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 200.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 199.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 197.6
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 196.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 196.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 195.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 194.6
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 193.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 191.5
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 190.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 187.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 187.3
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 187.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 186.2
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 185.4
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 185.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 184.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 184.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 183.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 183.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 180.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 179.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 178.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 178.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 178.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 178.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 177.3
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 176.7
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 176.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 175.3
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 175.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 174.5
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 174.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 174.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 174.2
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 173.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 172.7
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 172.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 172.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 172.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 171.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 171.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 171.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 170.0
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 169.6
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 169.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 169.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 169.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 168.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 168.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 167.3
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 167.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 166.9
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 166.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 166.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 166.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 166.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 165.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 165.8
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 165.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 165.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 164.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 164.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 164.3
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 164.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 163.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 163.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 163.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 162.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 162.4
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 162.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 162.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 162.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 162.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 161.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 161.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 161.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 161.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 161.2
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 160.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 160.7
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 160.7
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 160.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 159.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 159.1
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 158.7
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 158.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 158.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 158.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 157.9
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 157.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 157.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 157.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 157.0
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 157.0
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 156.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 156.6
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 156.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 156.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 155.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 155.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 155.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 154.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 153.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 153.7
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 153.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 153.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 153.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 153.4
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 153.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 153.0
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 152.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 152.0
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 151.9
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 151.2
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 151.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 150.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 150.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 150.0
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 149.9
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 149.8
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 149.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 148.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 148.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 147.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 147.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 147.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 146.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 146.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 145.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 145.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 145.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 145.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 145.0
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 144.5
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 144.4
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 143.3
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 142.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 142.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 142.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 140.6
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 140.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 140.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 139.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 139.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 139.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 138.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 138.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 138.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 137.9
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 137.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 137.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 137.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 136.4
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 136.2
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 135.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 135.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 135.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 135.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 135.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 134.7
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 134.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 134.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 133.5
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 131.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 131.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 131.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 129.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 129.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 128.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 127.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 126.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 125.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 124.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 123.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 123.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 121.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 119.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 118.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 117.2
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 113.7
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 112.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 111.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 107.1
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 102.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 97.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 95.7
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

66.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 66.4
FF:10159-103A6 76 years, female 81.2
FF:10181-103D1 60 years, female 51.6

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.6
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 114.2
Samples: 2

Max nTPM: 146.0
Min nTPM: 82.3
Sample A 82.3
Sample B 146.0
Ventral spinal cord
nTPM: 132.6
Samples: 1

Max nTPM: 132.6
Min nTPM: 132.6
Sample A 132.6

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

256.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 211.6
Samples: 4

Max nTPM: 229.2
Min nTPM: 195.1
Sample A Female 212.1
Sample B Female 195.1
Sample C Male 210.1
Sample D Male 229.2
Ventral spinal cord
nTPM: 256.5
Samples: 4

Max nTPM: 270.4
Min nTPM: 249.2
Sample A Female 249.2
Sample B Female 250.9
Sample C Male 270.4
Sample D Male 255.5

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

232.4
Mouse sample Sample description nTPM
Spinal cord
nTPM: 232.4
Samples: 4

Max nTPM: 262.2
Min nTPM: 210.5
Sample A 210.5
Sample B 262.2
Sample C 228.7
Sample D 228.0

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

223.0
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 223.0
Samples: 4

Max nTPM: 233.7
Min nTPM: 205.6
Sample A 232.8
Sample A 233.7
Sample A 220.0
Sample A 205.6

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