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  • NECAP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:43.2 nTPM
HPA Brain:114.5 nTPM
GTEx:43.2 nTPM
Pig:111.2 nTPM
Mouse:217.9 nTPM
Allen mouse:6.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 114.5
2226 Male, age 75, left hemisphere 182.2
1961 Female, age 42, unknown 46.8
Dorsomedial nucleus
nTPM: 37.0
2041 Female, age 72, unknown 42.4
1989 Male, age 62, unknown 36.9
2017 Female, age 42, unknown 31.8
Lateral hypothalamic area
nTPM: 96.7
2228 Male, age 66, unknown 157.0
2271 Male, age 75, both hemispheres 129.0
1791 Male, age 80, right hemisphere 69.5
2412 Male, age 62, unknown 31.2
Mammillary body
nTPM: 38.5
1923 Female, age 72, unknown 80.7
2413 Male, age 66, unknown 36.3
1948 Female, age 72, unknown 31.2
1945 Male, age 80, right hemisphere 23.1
1834 Female, age 42, unknown 21.4
Paraventricular nucleus
nTPM: 45.4
2700 Male, age 62, unknown 45.4
Preoptic area
nTPM: 47.5
1907 Male, age 80, right hemisphere 70.4
2414 Female, age 72, unknown 38.8
1861 Female, age 42, unknown 33.3
Supraoptic nucleus
nTPM: 39.2
1894 Female, age 72, unknown 53.9
2835 Female, age 72, unknown 36.1
2043 Male, age 62, unknown 27.6
Ventromedial nucleus
nTPM: 47.6
1982 Female, age 72, unknown 53.4
1822 Female, age 42, unknown 41.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 43.2
Samples: 257

Max nTPM: 113.8
Min nTPM: 7.7
Std nTPM: 21.0
Median nTPM: 41.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 113.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 100.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 98.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 94.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 93.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 90.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 87.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 87.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 84.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 83.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 83.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 82.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 81.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 79.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 78.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 78.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 77.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 76.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 75.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 73.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 73.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 73.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 73.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 72.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 72.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 72.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 72.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 71.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 71.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 70.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 70.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 70.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 69.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 69.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 69.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 69.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 69.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 68.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 68.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 68.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 68.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 68.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 67.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 67.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 65.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 65.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 64.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 64.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 64.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 63.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 62.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 62.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 61.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 61.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 61.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 61.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 60.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 60.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 59.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 59.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 59.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 59.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 58.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 58.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 58.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 58.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 57.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 57.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 57.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 56.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 56.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 55.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 55.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 55.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 53.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 53.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 53.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 53.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 53.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 52.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 52.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 52.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 52.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 52.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 52.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 52.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 51.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 51.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 51.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 50.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 50.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 49.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 48.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 48.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 48.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 48.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 48.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 47.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 47.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 47.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 47.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 46.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 46.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 46.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 45.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 45.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 45.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 45.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 45.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 45.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 44.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 44.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 44.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 43.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 43.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 43.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 43.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 43.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 43.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 43.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 42.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 42.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 42.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 41.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 41.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 41.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 41.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 41.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 41.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 41.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 41.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 40.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 40.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 40.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 40.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 40.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 40.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 39.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 39.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 39.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 38.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 38.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 37.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 37.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 36.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 36.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 35.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 35.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 34.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 34.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 34.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 33.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 33.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 32.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 32.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 31.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 31.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 31.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 31.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 31.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 31.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 31.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 30.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 30.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 30.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 30.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 30.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 29.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 29.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 29.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 29.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 29.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 28.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 28.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 28.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 28.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 28.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 28.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 28.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 28.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 27.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 27.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 27.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 27.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 27.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 27.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 27.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 27.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 27.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 27.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 27.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 27.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 26.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 26.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 26.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 26.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 26.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 26.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 26.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 25.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 25.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 24.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 24.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 24.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 23.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 23.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 23.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 23.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 23.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 23.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 22.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 22.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 22.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 22.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 22.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 21.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 21.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 21.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 21.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 21.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 21.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 20.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 20.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 19.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 19.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 19.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 19.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 19.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 18.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 18.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 18.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 18.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 18.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 17.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 17.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 17.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 17.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 16.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 16.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 16.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 15.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 15.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 15.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 15.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 14.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 14.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 13.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 13.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 12.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 11.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 11.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 10.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 10.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 10.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 9.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 8.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 7.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 111.2
Samples: 4

Max nTPM: 150.9
Min nTPM: 95.0
Sample A Female 150.9
Sample B Female 102.5
Sample C Male 96.5
Sample D Male 95.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 217.9
Samples: 4

Max nTPM: 230.0
Min nTPM: 201.7
Sample A Male 211.0
Sample B Male 228.7
Sample C Female 230.0
Sample D Female 201.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.5
69169421 Antisense, RP_050321_03_E07, Mouse strain C57BL/6J (56 days, male) 6.5

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