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IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:5.7 nTPM
Monaco:23.6 nTPM
Schmiedel:28.3 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

5.7
HPA sample nTPM
NK-cell
nTPM: 5.7
Samples: 6

Max nTPM: 10.1
Min nTPM: 2.3
P10809_1013 3.8
P10809_1033 7.3
P10809_1052 5.5
P10809_1071 5.0
P10809_1093 2.3
P10809_1103 10.1

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

23.6
Monaco sample nTPM
NK-cell
nTPM: 23.6
Samples: 4

Max nTPM: 29.6
Min nTPM: 16.7
RHH5316_R3683 22.7
RHH5224_R3596 29.6
RHH5253_R3625 16.7
RHH5282_R3654 25.4

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

28.3
Schmiedel sample id TPM
NK-cell
TPM: 28.3
Samples: 90

Max TPM: 40.5
Min TPM: 11.6
NK_1 40.5
NK_2 39.4
NK_3 39.1
NK_4 38.6
NK_5 36.3
NK_6 36.2
NK_7 35.4
NK_8 35.0
NK_9 34.3
NK_10 33.5
NK_11 33.2
NK_12 33.0
NK_13 33.0
NK_14 32.9
NK_15 32.7
NK_16 32.6
NK_17 32.3
NK_18 32.3
NK_19 32.1
NK_20 31.8
NK_21 31.8
NK_22 31.7
NK_23 31.5
NK_24 31.3
NK_25 31.3
NK_26 31.2
NK_27 31.0
NK_28 30.9
NK_29 30.6
NK_30 30.5
NK_31 30.4
NK_32 30.3
NK_33 29.6
NK_34 29.4
NK_35 29.2
NK_36 29.1
NK_37 29.1
NK_38 28.9
NK_39 28.8
NK_40 28.8
NK_41 28.8
NK_42 28.7
NK_43 28.2
NK_44 28.1
NK_45 28.0
NK_46 28.0
NK_47 27.9
NK_48 27.4
NK_49 27.0
NK_50 26.9
NK_51 26.9
NK_52 26.8
NK_53 26.8
NK_54 26.7
NK_55 26.5
NK_56 26.5
NK_57 26.3
NK_58 26.3
NK_59 26.3
NK_60 26.2
NK_61 26.1
NK_62 26.1
NK_63 26.0
NK_64 26.0
NK_65 25.9
NK_66 25.3
NK_67 25.2
NK_68 25.1
NK_69 25.0
NK_70 24.8
NK_71 24.8
NK_72 24.5
NK_73 24.5
NK_74 24.4
NK_75 24.3
NK_76 24.2
NK_77 24.1
NK_78 24.1
NK_79 23.2
NK_80 23.0
NK_81 22.7
NK_82 22.5
NK_83 22.3
NK_84 21.8
NK_85 21.8
NK_86 21.8
NK_87 21.6
NK_88 21.2
NK_89 19.3
NK_90 11.6
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