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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • PCBP4
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:154.5 nTPM
HPA Brain:130.7 nTPM
GTEx:154.5 nTPM
FANTOM5:109.3 Scaled Tags Per Million
Macaque:116.1 nTPM
Mouse:102.6 nTPM
Rat:140.1 nTPM
Pig:176.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - PROTEINTALKS DB MS
Median intensity ND
Sample Intensity
Spinal cord_01
ND
Spinal cord_02
ND
Spinal cord_03
ND
Spinal cord_04
ND
Spinal cord_05
ND
Spinal cord_06
ND
Spinal cord_07
ND
Spinal cord_08
ND

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.7
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 129.3
2734 Male, age 80, both hemispheres 146.1
2818 Female, age 79, both hemispheres 136.3
2819 Male, age 47, both hemispheres 128.8
2193 Male, age 75, both hemispheres 105.8
Cervical spinal cord, central gray
nTPM: 95.8
2194 Female, age 79, both hemispheres 107.3
2816 Male, age 47, midline 104.8
1981 Female, age 72, midline 102.7
2048 Male, age 55, midline 86.1
2565 Male, age 75, midline 78.3
Cervical spinal cord, dorsal horn
nTPM: 105.6
2296 Male, age 66, both hemispheres 156.7
2173 Female, age 72, unknown 132.7
1877 Male, age 55, unknown 95.9
2721 Male, age 90, both hemispheres 93.2
2069 Male, age 47, both hemispheres 85.4
2297 Male, age 75, both hemispheres 69.5
Cervical spinal cord, ventral horn
nTPM: 108.2
2820 Female, age 79, both hemispheres 137.2
2068 Male, age 55, unknown 130.4
2098 Female, age 72, unknown 101.0
2480 Male, age 75, both hemispheres 94.3
2809 Male, age 90, both hemispheres 93.0
2295 Male, age 66, both hemispheres 92.9
Dorsal funiculus (white matter)
nTPM: 130.7
2817 Male, age 47, both hemispheres 140.4
2064 Female, age 79, both hemispheres 137.3
2810 Male, age 90, both hemispheres 137.2
2128 Male, age 75, both hemispheres 119.6
2812 Male, age 66, both hemispheres 118.8
Lateral funiculus (white matter)
nTPM: 117.1
2099 Male, age 90, both hemispheres 137.5
2094 Female, age 79, both hemispheres 131.2
2192 Male, age 75, both hemispheres 105.1
2294 Male, age 66, both hemispheres 94.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

154.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 154.5
Samples: 204

Max nTPM: 301.6
Min nTPM: 38.6
Std nTPM: 49.8
Median nTPM: 150.7
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 301.6
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 286.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 276.5
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 271.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 271.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 263.5
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 262.9
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 252.7
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 249.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 246.7
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 245.0
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 241.9
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 235.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 234.8
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 233.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 229.7
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 229.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 227.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 224.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 224.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 223.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 223.2
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 221.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 220.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 216.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 216.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 216.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 213.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 213.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 210.9
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 207.7
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 207.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 207.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 205.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 198.9
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 196.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 195.9
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 195.9
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 195.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 193.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 193.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 190.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 189.8
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 188.4
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 185.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 185.8
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 185.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 184.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 184.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 184.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 184.2
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 183.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 182.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 181.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 181.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 180.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 179.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 178.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 177.8
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 177.6
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 176.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 175.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 174.2
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 173.9
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 171.5
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 169.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 169.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 169.0
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 168.9
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 168.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 168.3
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 167.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 167.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 167.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 167.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 165.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 165.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 165.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 165.2
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 165.1
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 164.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 163.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 163.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 162.9
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 162.7
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 162.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 162.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 161.7
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 161.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 161.3
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 160.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 159.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 159.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 159.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 159.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 158.7
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 156.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 155.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 154.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 152.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 151.9
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 150.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 150.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 150.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 149.9
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 149.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 147.9
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 147.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 146.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 146.7
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 146.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 146.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 145.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 145.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 144.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 144.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 144.4
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 144.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 144.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 143.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 142.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 141.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 140.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 140.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 139.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 138.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 138.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 138.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 136.1
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 134.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 133.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 133.3
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 132.9
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 132.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 132.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 132.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 132.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 131.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 131.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 130.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 130.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 129.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 129.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 129.0
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 128.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 126.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 126.2
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 125.4
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 123.9
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 123.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 122.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 121.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 121.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 121.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 117.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 117.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 117.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 117.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 115.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 115.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 113.5
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 111.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 111.0
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 109.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 108.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 107.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 107.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 106.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 106.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 105.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 104.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 103.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 102.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 101.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 101.6
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 101.4
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 101.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 99.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 96.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 96.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 95.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 95.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 93.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 92.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 90.5
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 90.2
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 88.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 87.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 85.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 85.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 84.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 83.6
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 82.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 78.1
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 77.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 73.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 73.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 73.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 61.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 59.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 59.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 56.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 45.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 38.6
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

109.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 109.3
FF:10181-103D1 60 years, female 126.8
FF:10159-103A6 76 years, female 91.7

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.1
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 67.7
Samples: 2

Max nTPM: 103.9
Min nTPM: 31.5
Sample A 31.5
Sample B 103.9
Ventral spinal cord
nTPM: 116.1
Samples: 1

Max nTPM: 116.1
Min nTPM: 116.1
Sample A 116.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

176.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 158.2
Samples: 4

Max nTPM: 165.9
Min nTPM: 146.4
Sample A Female 146.4
Sample B Female 159.5
Sample C Male 160.8
Sample D Male 165.9
Ventral spinal cord
nTPM: 176.5
Samples: 4

Max nTPM: 190.9
Min nTPM: 166.2
Sample A Female 174.6
Sample B Female 166.2
Sample C Male 174.3
Sample D Male 190.9

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.6
Mouse sample Sample description nTPM
Spinal cord
nTPM: 102.6
Samples: 4

Max nTPM: 123.9
Min nTPM: 87.9
Sample A 87.9
Sample B 123.9
Sample C 104.4
Sample D 94.1

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.1
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 140.2
Samples: 4

Max nTPM: 148.4
Min nTPM: 125.7
Sample A 140.5
Sample A 148.4
Sample A 146.0
Sample A 125.7

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