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  • TISSUE

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  • PCBP4
TISSUE HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:93.5 nTPM
HPA Brain:108.3 nTPM
GTEx:93.5 nTPM
Pig:78.4 nTPM
Mouse:56.2 nTPM
Allen mouse:17.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 54.3
1961 Female, age 42, unknown 56.0
2226 Male, age 75, left hemisphere 52.6
Dorsomedial nucleus
nTPM: 78.4
2017 Female, age 42, unknown 93.4
1989 Male, age 62, unknown 72.9
2041 Female, age 72, unknown 69.0
Lateral hypothalamic area
nTPM: 90.8
2228 Male, age 66, unknown 107.9
1791 Male, age 80, right hemisphere 94.1
2271 Male, age 75, both hemispheres 87.7
2412 Male, age 62, unknown 73.5
Mammillary body
nTPM: 108.3
1945 Male, age 80, right hemisphere 122.5
1948 Female, age 72, unknown 114.1
1834 Female, age 42, unknown 109.5
2413 Male, age 66, unknown 103.3
1923 Female, age 72, unknown 92.3
Paraventricular nucleus
nTPM: 106.1
2700 Male, age 62, unknown 106.1
Preoptic area
nTPM: 99.5
2414 Female, age 72, unknown 118.7
1861 Female, age 42, unknown 92.0
1907 Male, age 80, right hemisphere 87.7
Supraoptic nucleus
nTPM: 86.4
2043 Male, age 62, unknown 101.4
2835 Female, age 72, unknown 86.4
1894 Female, age 72, unknown 71.5
Ventromedial nucleus
nTPM: 51.2
1822 Female, age 42, unknown 53.4
1982 Female, age 72, unknown 48.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 93.5
Samples: 257

Max nTPM: 240.7
Min nTPM: 24.5
Std nTPM: 29.9
Median nTPM: 89.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 240.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 224.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 193.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 173.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 163.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 159.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 159.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 156.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 155.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 153.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 153.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 152.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 148.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 145.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 142.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 141.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 140.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 138.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 138.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 135.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 135.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 135.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 134.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 134.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 134.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 133.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 132.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 131.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 131.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 130.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 128.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 127.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 125.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 123.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 123.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 122.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 121.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 121.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 120.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 119.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 118.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 117.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 117.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 117.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 116.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 116.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 115.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 115.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 114.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 113.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 113.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 113.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 113.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 112.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 112.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 111.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 111.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 110.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 109.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 108.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 108.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 108.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 108.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 108.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 108.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 107.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 107.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 107.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 106.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 105.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 105.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 105.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 105.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 104.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 103.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 102.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 101.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 101.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 101.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 101.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 100.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 100.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 100.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 100.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 100.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 100.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 100.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 99.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 99.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 99.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 99.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 99.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 99.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 99.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 99.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 99.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 98.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 98.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 98.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 97.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 97.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 97.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 97.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 97.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 96.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 96.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 95.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 95.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 95.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 95.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 95.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 94.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 94.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 94.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 93.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 92.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 92.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 92.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 91.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 91.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 91.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 91.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 90.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 90.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 90.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 90.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 89.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 89.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 89.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 89.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 88.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 88.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 88.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 88.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 88.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 88.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 87.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 87.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 87.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 87.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 87.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 87.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 87.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 86.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 86.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 86.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 85.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 85.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 85.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 85.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 85.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 84.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 84.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 84.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 84.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 84.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 84.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 83.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 83.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 83.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 82.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 82.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 82.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 82.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 82.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 81.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 81.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 81.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 81.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 81.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 81.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 81.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 80.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 80.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 80.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 79.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 79.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 79.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 79.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 79.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 79.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 77.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 77.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 76.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 76.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 76.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 76.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 76.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 75.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 74.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 74.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 74.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 74.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 74.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 74.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 74.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 74.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 73.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 73.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 73.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 72.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 71.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 71.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 71.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 71.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 70.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 70.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 69.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 68.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 68.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 68.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 67.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 67.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 67.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 66.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 66.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 66.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 64.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 64.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 63.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 63.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 63.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 63.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 63.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 63.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 63.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 62.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 62.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 61.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 60.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 60.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 59.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 58.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 57.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 57.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 56.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 56.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 56.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 56.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 56.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 55.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 55.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 55.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 54.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 53.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 52.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 52.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 51.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 51.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 49.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 49.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 43.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 35.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 34.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 27.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 26.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 24.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 78.4
Samples: 4

Max nTPM: 93.0
Min nTPM: 50.3
Sample A Female 87.9
Sample B Female 93.0
Sample C Male 82.4
Sample D Male 50.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 56.2
Samples: 4

Max nTPM: 61.9
Min nTPM: 49.8
Sample A Male 61.9
Sample B Male 59.1
Sample C Female 49.8
Sample D Female 53.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 17.4
67936208 Antisense, RP_040928_01_A08, Mouse strain C57BL/6J (56 days, male) 17.4
68196977 Antisense, RP_040928_01_A08, Mouse strain C57BL/6J (56 days, male) 9.0

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