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  • NDUFB2
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:359.2 nTPM
HPA Brain:195.9 nTPM
GTEx:359.2 nTPM
FANTOM5:58.7 Scaled Tags Per Million
Pig:36.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

195.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 166.0
1981 Female, age 72, midline 219.2
2565 Male, age 75, midline 164.8
2048 Male, age 55, midline 149.9
2194 Female, age 79, both hemispheres 148.9
2816 Male, age 47, midline 147.2
Cervical spinal cord, dorsal horn
nTPM: 171.9
2173 Female, age 72, unknown 267.6
2069 Male, age 47, both hemispheres 186.8
2296 Male, age 66, both hemispheres 169.0
1877 Male, age 55, unknown 161.3
2297 Male, age 75, both hemispheres 129.3
2721 Male, age 90, both hemispheres 117.2
Cervical spinal cord, ventral horn
nTPM: 195.9
2480 Male, age 75, both hemispheres 238.5
2098 Female, age 72, unknown 228.4
2809 Male, age 90, both hemispheres 206.6
2068 Male, age 55, unknown 197.3
2295 Male, age 66, both hemispheres 175.0
2820 Female, age 79, both hemispheres 129.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

359.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 359.2
Samples: 204

Max nTPM: 670.1
Min nTPM: 148.7
Std nTPM: 92.1
Median nTPM: 352.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 670.1
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 642.0
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 599.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 596.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 590.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 568.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 549.8
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 540.5
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 539.0
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 535.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 527.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 527.3
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 510.4
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 509.0
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 508.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 490.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 479.7
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 478.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 477.8
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 477.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 475.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 468.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 464.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 464.0
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 462.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 461.8
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 460.7
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 459.6
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 457.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 456.9
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 456.4
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 453.1
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 450.4
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 449.5
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 448.5
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 448.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 447.5
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 446.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 443.2
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 434.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 431.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 430.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 428.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 424.0
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 423.6
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 422.9
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 421.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 419.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 419.2
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 418.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 414.2
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 413.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 413.2
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 413.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 413.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 411.2
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 410.4
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 405.4
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 402.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 402.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 401.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 397.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 396.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 396.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 395.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 391.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 391.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 391.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 390.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 389.9
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 387.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 387.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 385.8
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 383.8
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 382.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 380.9
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 380.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 380.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 377.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 375.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 373.4
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 370.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 370.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 370.2
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 369.2
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 366.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 365.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 364.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 364.1
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 362.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 361.1
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 360.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 360.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 359.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 359.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 358.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 356.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 356.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 354.1
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 353.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 353.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 352.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 351.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 347.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 347.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 347.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 347.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 346.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 346.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 346.1
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 345.6
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 345.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 345.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 344.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 344.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 344.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 342.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 342.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 338.9
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 338.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 335.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 334.4
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 334.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 331.8
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 330.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 330.0
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 329.1
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 328.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 325.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 324.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 320.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 320.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 319.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 318.8
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 315.8
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 313.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 313.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 312.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 311.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 311.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 311.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 308.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 308.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 303.4
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 297.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 295.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 295.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 293.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 293.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 292.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 286.9
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 286.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 285.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 284.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 284.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 283.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 281.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 280.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 279.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 279.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 278.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 277.8
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 277.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 276.5
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 275.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 274.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 273.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 272.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 272.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 271.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 270.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 270.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 263.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 260.7
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 260.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 259.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 257.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 257.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 256.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 254.2
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 252.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 251.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 250.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 249.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 249.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 247.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 245.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 244.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 240.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 238.5
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 236.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 235.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 235.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 230.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 229.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 227.9
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 225.5
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 219.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 206.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 206.5
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 196.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 189.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 159.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 148.7
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

58.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 58.7
FF:10181-103D1 60 years, female 75.4
FF:10159-103A6 76 years, female 42.0

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 30.6
Samples: 4

Max nTPM: 34.7
Min nTPM: 27.6
Sample A Female 34.7
Sample B Female 29.2
Sample C Male 27.6
Sample D Male 30.9
Ventral spinal cord
nTPM: 36.3
Samples: 4

Max nTPM: 38.8
Min nTPM: 33.5
Sample A Female 38.5
Sample B Female 38.8
Sample C Male 33.5
Sample D Male 34.4

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