HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:15.7 nTPM
HPA Brain:234.9 nTPM
GTEx:15.7 nTPM
FANTOM5:223.6 Scaled Tags Per Million
Pig:192.1 nTPM
Mouse:143.0 nTPM
Allen mouse:8.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012606
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 234.9
Sample id Sample description nTPM
Hippocampus
nTPM: 187.6
1898 Male, age 80, left hemisphere 218.7
2148 Female, age 91, left hemisphere 201.4
2621 Female, age 67, right hemisphere 189.9
1855 Male, age 76, left hemisphere 185.0
2529 Female, age 94, left hemisphere 165.4
1911 Female, age 85, right hemisphere 165.3
Dentate gyrus
nTPM: 181.3
1927 Female, age 91, both hemispheres 217.7
2246 Female, age 85, both hemispheres 208.0
2528 Male, age 74, both hemispheres 197.3
2010 Male, age 76, both hemispheres 170.4
2531 Female, age 67, both hemispheres 170.4
2530 Female, age 94, left hemisphere 123.9
Entorhinal gyrus
nTPM: 175.7
1938 Female, age 85, left hemisphere 215.9
2613 Female, age 94, left hemisphere 176.5
1787 Male, age 76, left hemisphere 172.6
2764 Male, age 80, right hemisphere 165.8
2117 Female, age 91, right hemisphere 165.2
2686 Male, age 75, right hemisphere 158.0
Hippocampus, CA1
nTPM: 206.2
2749 Male, age 80, left hemisphere 226.2
2527 Male, age 74, both hemispheres 224.9
1873 Female, age 85, both hemispheres 223.7
2045 Male, age 76, both hemispheres 178.7
2082 Female, age 91, right hemisphere 177.7
Hippocampus, CA2
nTPM: 177.1
1963 Male, age 80, left hemisphere 190.6
2249 Male, age 74, both hemispheres 186.6
1892 Male, age 76, both hemispheres 181.0
2113 Female, age 91, right hemisphere 180.6
1940 Female, age 85, left hemisphere 171.4
2437 Female, age 94, left hemisphere 152.1
Hippocampus, CA3
nTPM: 168.8
2137 Male, age 80, left hemisphere 186.2
2436 Male, age 74, both hemispheres 173.8
2861 Female, age 67, both hemispheres 168.3
2620 Female, age 94, left hemisphere 167.5
1891 Female, age 85, both hemispheres 165.7
1867 Male, age 76, both hemispheres 151.2
Parahippocampal cortex
nTPM: 201.1
1850 Male, age 80, both hemispheres 242.7
2250 Female, age 67, right hemisphere 221.2
1933 Female, age 85, both hemispheres 216.7
2245 Female, age 91, both hemispheres 210.0
2622 Female, age 67, right hemisphere 202.6
1990 Female, age 91, right hemisphere 198.3
2693 Female, age 94, both hemispheres 197.3
2532 Female, age 72, left hemisphere 189.9
2692 Male, age 74, both hemispheres 174.5
2018 Male, age 76, both hemispheres 158.3
Perirhinal gyrus
nTPM: 234.9
1841 Female, age 85, right hemisphere 258.3
1847 Female, age 91, left hemisphere 255.7
1794 Male, age 80, right hemisphere 246.2
2521 Female, age 94, right hemisphere 226.4
2848 Male, age 76, right hemisphere 187.8
Subiculum
nTPM: 170.8
2729 Female, age 91, right hemisphere 199.2
1977 Female, age 85, both hemispheres 184.7
2619 Male, age 74, both hemispheres 184.5
2438 Female, age 94, left hemisphere 180.7
1901 Male, age 80, both hemispheres 160.5
2042 Male, age 76, both hemispheres 115.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.7
Samples: 255

Max nTPM: 58.0
Min nTPM: 0.7
Std nTPM: 10.0
Median nTPM: 12.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 58.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 50.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 47.6
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 45.3
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 43.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 43.3
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 41.3
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 39.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 38.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 38.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 37.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 223.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 223.6
FF:10169-103B7 60 years, female 246.1
FF:10153-102I9 76 years, female 201.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 192.1
Pig sample Sample description nTPM
Subiculum
nTPM: 142.4
Samples: 4

Max nTPM: 170.2
Min nTPM: 123.5
Sample A Female 170.2
Sample B Female 128.9
Sample C Male 147.0
Sample D Male 123.5
Dorsal hippocampus
nTPM: 192.1
Samples: 4

Max nTPM: 216.1
Min nTPM: 165.3
Sample A Female 216.1
Sample B Female 209.4
Sample C Male 165.3
Sample D Male 177.7
Entorhinal cortex
nTPM: 161.9
Samples: 4

Max nTPM: 165.9
Min nTPM: 153.2
Sample A Female 165.8
Sample B Female 165.9
Sample C Male 162.7
Sample D Male 153.2
Ventral hippocampus
nTPM: 184.6
Samples: 4

Max nTPM: 218.9
Min nTPM: 134.5
Sample A Female 218.9
Sample B Female 134.5
Sample C Male 197.3
Sample D Male 187.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 143.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 143.0
Samples: 4

Max nTPM: 179.1
Min nTPM: 126.5
Sample A Male 135.0
Sample B Male 131.2
Sample C Female 126.5
Sample D Female 179.1
Hippocampal formation
nTPM: 125.4
Samples: 4

Max nTPM: 142.1
Min nTPM: 104.7
Sample A Male 120.1
Sample B Male 134.6
Sample C Female 142.1
Sample D Female 104.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
172 Antisense, RP_Baylor_103411, Mouse strain C57BL/6J (56 days, male) 8.8
173 Antisense, RP_Baylor_103411, Mouse strain C57BL/6J (56 days, male) 6.5

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