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TXNL1
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • TXNL1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

127.021
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:44.4 nTPM
HPA Brain:56.9 nTPM
GTEx:44.4 nTPM
Pig:125.2 nTPM
Mouse:117.1 nTPM
Allen mouse:7.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA002828
Hypothalamus mean intensity 127.021
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 40.320
Periventricular hypothalamic nucleus 110.780
Supraoptic nucleus 127.021
Tuberal nucleus 35.823
Ventral tuberomammillary nucleus -
Lateral preoptic area 32.669
Medial preoptic area 78.805
Suprachiasmatic nucleus 39.903
Paraventricular hypothalamic nucleus 84.558
Anterior hypothalamic area, central 36.606
Ventral medial hypothalamic nucleus 44.449
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 59.841
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 31.384
Dorsal medial hypothalamic nucleus 41.358
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 53.9
2226 Male, age 75, left hemisphere 67.3
1961 Female, age 42, unknown 40.5
Dorsomedial nucleus
nTPM: 44.1
2041 Female, age 72, unknown 50.9
2017 Female, age 42, unknown 40.8
1989 Male, age 62, unknown 40.5
Lateral hypothalamic area
nTPM: 56.9
1791 Male, age 80, right hemisphere 60.1
2271 Male, age 75, both hemispheres 57.7
2228 Male, age 66, unknown 57.1
2412 Male, age 62, unknown 52.8
Mammillary body
nTPM: 53.4
1923 Female, age 72, unknown 64.9
2413 Male, age 66, unknown 55.5
1948 Female, age 72, unknown 53.1
1834 Female, age 42, unknown 46.9
1945 Male, age 80, right hemisphere 46.4
Paraventricular nucleus
nTPM: 45.8
2700 Male, age 62, unknown 45.8
Preoptic area
nTPM: 46.2
1907 Male, age 80, right hemisphere 49.8
2414 Female, age 72, unknown 47.8
1861 Female, age 42, unknown 41.1
Supraoptic nucleus
nTPM: 52.2
1894 Female, age 72, unknown 61.9
2043 Male, age 62, unknown 49.4
2835 Female, age 72, unknown 45.3
Ventromedial nucleus
nTPM: 48.8
1982 Female, age 72, unknown 51.6
1822 Female, age 42, unknown 45.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 44.4
Samples: 257

Max nTPM: 73.9
Min nTPM: 25.1
Std nTPM: 9.6
Median nTPM: 43.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 73.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 72.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 72.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 71.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 71.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 70.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 70.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 66.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 66.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 66.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 65.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 64.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 64.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 63.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 63.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 63.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 63.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 63.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 60.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 59.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 58.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 58.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 58.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 57.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 56.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 56.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 56.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 56.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 56.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 55.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 55.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 55.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 55.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 55.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 55.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 54.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 54.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 54.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 54.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 53.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 52.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 52.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 52.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 52.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 52.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 52.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 51.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 51.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 51.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 51.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 51.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 51.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 50.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 50.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 50.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 50.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 50.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 50.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 50.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 50.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 50.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 50.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 49.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 49.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 49.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 48.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 48.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 48.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 48.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 48.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 48.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 48.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 48.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 47.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 47.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 47.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 47.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 47.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 47.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 47.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 47.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 47.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 46.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 46.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 46.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 46.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 46.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 46.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 46.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 46.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 46.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 46.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 46.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 46.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 46.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 46.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 46.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 46.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 46.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 46.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 45.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 45.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 45.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 45.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 45.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 45.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 45.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 45.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 45.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 45.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 44.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 44.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 44.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 44.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 44.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 44.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 44.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 44.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 44.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 44.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 44.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 44.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 44.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 43.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 43.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 43.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 43.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 43.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 43.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 43.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 43.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 43.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 43.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 42.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 42.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 42.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 42.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 42.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 42.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 42.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 42.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 42.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 42.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 42.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 42.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 42.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 42.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 42.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 41.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 41.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 41.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 41.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 41.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 41.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 41.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 41.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 41.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 41.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 41.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 40.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 40.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 40.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 40.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 40.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 40.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 40.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 40.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 40.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 40.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 40.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 40.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 39.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 39.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 39.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 39.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 39.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 39.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 39.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 39.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 39.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 39.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 39.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 39.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 39.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 39.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 38.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 38.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 38.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 38.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 38.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 38.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 38.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 38.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 37.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 37.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 37.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 37.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 37.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 37.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 37.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 37.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 36.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 36.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 36.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 36.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 36.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 36.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 35.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 35.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 35.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 35.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 35.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 35.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 34.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 34.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 34.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 34.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 34.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 34.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 34.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 34.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 34.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 34.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 34.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 34.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 33.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 33.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 33.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 33.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 33.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 33.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 33.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 33.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 33.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 32.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 32.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 32.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 32.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 32.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 31.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 30.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 30.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 30.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 30.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 29.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 29.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 29.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 29.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 28.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 28.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 28.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 27.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 26.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 26.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 25.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 25.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 125.2
Samples: 4

Max nTPM: 154.4
Min nTPM: 112.9
Sample A Female 154.4
Sample B Female 119.0
Sample C Male 114.3
Sample D Male 112.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 117.1
Samples: 4

Max nTPM: 126.5
Min nTPM: 107.6
Sample A Male 114.4
Sample B Male 126.5
Sample C Female 119.8
Sample D Female 107.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.2
69117056 Antisense, RP_050321_01_F09, Mouse strain C57BL/6J (56 days, male) 7.2

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