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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

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  • FH
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

158.077
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:34.9 nTPM
HPA Brain:27.3 nTPM
GTEx:34.9 nTPM
Pig:26.8 nTPM
Mouse:88.1 nTPM
Allen mouse:9.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA025770
Hypothalamus mean intensity 158.077
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus -
Periventricular hypothalamic nucleus 156.200
Supraoptic nucleus 71.602
Tuberal nucleus 38.727
Ventral tuberomammillary nucleus -
Lateral preoptic area 70.000
Medial preoptic area 61.123
Suprachiasmatic nucleus 145.113
Paraventricular hypothalamic nucleus 158.077
Anterior hypothalamic area, central 132.808
Ventral medial hypothalamic nucleus -
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 151.211
Arcuate nucleus* -
Peduncular part of lateral hypothalmus -
Dorsal medial hypothalamic nucleus 137.225
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 22.2
2226 Male, age 75, left hemisphere 28.1
1961 Female, age 42, unknown 16.3
Dorsomedial nucleus
nTPM: 18.9
1989 Male, age 62, unknown 21.2
2041 Female, age 72, unknown 18.6
2017 Female, age 42, unknown 16.9
Lateral hypothalamic area
nTPM: 22.3
1791 Male, age 80, right hemisphere 27.2
2271 Male, age 75, both hemispheres 25.2
2228 Male, age 66, unknown 21.0
2412 Male, age 62, unknown 15.9
Mammillary body
nTPM: 27.3
1923 Female, age 72, unknown 41.8
2413 Male, age 66, unknown 28.2
1945 Male, age 80, right hemisphere 23.2
1948 Female, age 72, unknown 22.8
1834 Female, age 42, unknown 20.5
Paraventricular nucleus
nTPM: 15.3
2700 Male, age 62, unknown 15.3
Preoptic area
nTPM: 21.3
1907 Male, age 80, right hemisphere 25.0
1861 Female, age 42, unknown 21.8
2414 Female, age 72, unknown 17.0
Supraoptic nucleus
nTPM: 21.9
1894 Female, age 72, unknown 26.9
2835 Female, age 72, unknown 19.8
2043 Male, age 62, unknown 19.0
Ventromedial nucleus
nTPM: 19.3
1982 Female, age 72, unknown 21.8
1822 Female, age 42, unknown 16.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 34.9
Samples: 257

Max nTPM: 61.3
Min nTPM: 14.6
Std nTPM: 6.6
Median nTPM: 34.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 61.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 56.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 55.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 55.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 50.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 49.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 49.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 48.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 48.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 47.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 47.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 47.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 46.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 45.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 44.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 44.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 44.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 44.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 44.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 43.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 43.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 43.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 43.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 43.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 43.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 42.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 42.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 42.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 42.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 42.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 41.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 41.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 41.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 41.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 41.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 41.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 40.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 40.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 40.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 40.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 40.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 40.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 40.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 40.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 40.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 40.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 40.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 40.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 40.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 40.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 40.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 40.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 39.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 39.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 39.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 39.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 39.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 39.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 39.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 39.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 39.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 39.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 38.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 38.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 38.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 38.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 38.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 38.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 38.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 38.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 38.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 38.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 38.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 38.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 38.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 38.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 38.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 38.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 37.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 37.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 37.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 37.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 37.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 37.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 37.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 37.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 37.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 37.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 37.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 37.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 36.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 36.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 36.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 36.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 36.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 36.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 36.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 36.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 36.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 36.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 36.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 36.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 36.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 36.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 36.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 36.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 36.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 36.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 35.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 35.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 35.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 35.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 35.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 35.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 35.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 35.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 35.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 35.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 35.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 35.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 35.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 35.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 35.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 34.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 34.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 34.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 34.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 34.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 34.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 34.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 34.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 34.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 34.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 34.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 34.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 34.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 33.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 33.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 33.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 33.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 33.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 33.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 33.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 33.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 33.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 33.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 33.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 33.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 33.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 33.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 33.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 33.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 33.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 33.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 33.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 33.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 32.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 32.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 32.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 32.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 32.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 32.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 32.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 32.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 32.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 32.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 32.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 32.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 32.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 32.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 32.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 32.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 32.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 32.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 32.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 32.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 32.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 32.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 32.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 32.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 31.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 31.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 31.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 31.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 31.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 31.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 30.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 30.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 30.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 30.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 30.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 30.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 30.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 30.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 30.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 30.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 30.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 30.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 30.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 30.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 30.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 30.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 29.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 29.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 29.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 29.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 29.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 29.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 29.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 29.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 29.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 29.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 29.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 29.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 28.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 28.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 28.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 28.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 28.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 28.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 28.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 27.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 27.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 27.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 27.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 27.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 27.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 27.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 27.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 27.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 27.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 27.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 26.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 26.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 25.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 25.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 25.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 25.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 25.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 25.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 25.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 25.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 25.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 25.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 24.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 24.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 24.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 23.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 23.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 23.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 22.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 22.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 21.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 18.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 17.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 14.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 26.8
Samples: 4

Max nTPM: 30.5
Min nTPM: 23.9
Sample A Female 30.5
Sample B Female 27.6
Sample C Male 25.3
Sample D Male 23.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 88.2
Samples: 4

Max nTPM: 93.5
Min nTPM: 79.2
Sample A Male 79.2
Sample B Male 92.3
Sample C Female 93.5
Sample D Female 87.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.4
355890 Antisense, RP_040617_01_F08, Mouse strain C57BL/6J (56 days, male) 9.4
67936414 Antisense, RP_040617_01_F08, Mouse strain C57BL/6J (56 days, male) 5.0

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