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  • SUMMARY

  • TISSUE

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  • PSME1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:71.3 nTPM
HPA Brain:23.3 nTPM
GTEx:71.3 nTPM
Pig:75.7 nTPM
Mouse:78.4 nTPM
Allen mouse:5.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 17.6
2226 Male, age 75, left hemisphere 20.1
1961 Female, age 42, unknown 15.1
Dorsomedial nucleus
nTPM: 15.3
2041 Female, age 72, unknown 16.0
1989 Male, age 62, unknown 15.8
2017 Female, age 42, unknown 14.3
Lateral hypothalamic area
nTPM: 19.3
1791 Male, age 80, right hemisphere 22.6
2271 Male, age 75, both hemispheres 21.4
2412 Male, age 62, unknown 18.1
2228 Male, age 66, unknown 15.2
Mammillary body
nTPM: 20.8
1923 Female, age 72, unknown 23.1
2413 Male, age 66, unknown 21.3
1945 Male, age 80, right hemisphere 20.5
1948 Female, age 72, unknown 20.2
1834 Female, age 42, unknown 18.7
Paraventricular nucleus
nTPM: 15.8
2700 Male, age 62, unknown 15.8
Preoptic area
nTPM: 16.1
2414 Female, age 72, unknown 16.7
1861 Female, age 42, unknown 15.8
1907 Male, age 80, right hemisphere 15.7
Supraoptic nucleus
nTPM: 23.3
1894 Female, age 72, unknown 24.7
2043 Male, age 62, unknown 22.9
2835 Female, age 72, unknown 22.2
Ventromedial nucleus
nTPM: 15.0
1982 Female, age 72, unknown 15.1
1822 Female, age 42, unknown 14.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 71.3
Samples: 257

Max nTPM: 136.3
Min nTPM: 35.0
Std nTPM: 15.1
Median nTPM: 68.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 136.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 116.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 112.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 109.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 106.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 105.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 104.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 103.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 101.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 101.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 101.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 101.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 100.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 100.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 99.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 99.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 99.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 98.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 96.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 95.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 95.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 95.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 94.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 94.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 94.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 94.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 93.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 92.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 92.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 92.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 90.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 90.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 90.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 87.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 87.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 87.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 86.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 86.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 85.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 85.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 85.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 85.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 85.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 85.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 84.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 83.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 83.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 83.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 83.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 83.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 83.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 83.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 82.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 82.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 82.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 81.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 81.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 81.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 81.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 81.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 80.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 79.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 79.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 79.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 79.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 79.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 78.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 78.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 78.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 78.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 78.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 78.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 78.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 78.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 78.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 78.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 77.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 77.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 76.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 76.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 76.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 76.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 76.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 76.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 75.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 75.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 75.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 75.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 75.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 75.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 75.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 75.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 74.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 74.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 74.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 74.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 74.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 73.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 73.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 73.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 73.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 73.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 73.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 73.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 73.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 73.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 72.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 72.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 72.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 72.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 71.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 71.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 71.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 71.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 71.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 70.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 70.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 70.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 70.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 70.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 69.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 69.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 69.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 69.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 69.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 69.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 68.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 68.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 68.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 68.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 68.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 68.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 67.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 67.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 67.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 67.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 67.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 67.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 67.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 67.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 66.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 66.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 66.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 66.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 66.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 66.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 66.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 66.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 66.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 66.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 65.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 65.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 65.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 65.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 64.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 64.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 64.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 64.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 64.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 64.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 64.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 64.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 63.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 63.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 63.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 63.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 63.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 63.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 63.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 63.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 62.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 62.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 62.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 62.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 62.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 62.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 62.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 62.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 62.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 62.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 62.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 61.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 61.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 61.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 61.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 61.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 61.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 61.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 60.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 60.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 60.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 60.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 60.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 60.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 60.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 60.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 59.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 59.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 59.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 59.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 59.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 59.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 59.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 59.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 59.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 59.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 58.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 58.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 58.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 58.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 58.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 58.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 58.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 58.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 57.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 57.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 57.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 56.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 56.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 56.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 56.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 55.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 55.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 55.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 55.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 55.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 55.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 55.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 54.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 54.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 54.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 54.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 54.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 54.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 54.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 54.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 53.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 53.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 53.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 53.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 52.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 52.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 51.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 51.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 51.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 50.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 49.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 48.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 48.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 48.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 48.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 48.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 48.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 47.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 43.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 35.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 35.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 75.7
Samples: 4

Max nTPM: 101.5
Min nTPM: 66.0
Sample A Female 101.5
Sample B Female 66.0
Sample C Male 66.7
Sample D Male 68.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 78.4
Samples: 4

Max nTPM: 85.1
Min nTPM: 70.7
Sample A Male 80.4
Sample B Male 85.1
Sample C Female 77.4
Sample D Female 70.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.3
76115739 Antisense, RP_060620_02_C07, Mouse strain C57BL/6J (56 days, male) 6.9
69816715 Antisense, RP_050510_01_G02, Mouse strain C57BL/6J (56 days, male) 3.6

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