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SUPT16H
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  • TISSUE

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  • SUPT16H
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:13.1 nTPM
HPA Brain:46.4 nTPM
GTEx:13.1 nTPM
Pig:41.7 nTPM
Mouse:29.2 nTPM
Allen mouse:4.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 46.4
2226 Male, age 75, left hemisphere 49.9
1961 Female, age 42, unknown 42.8
Dorsomedial nucleus
nTPM: 38.5
2041 Female, age 72, unknown 45.1
2017 Female, age 42, unknown 36.7
1989 Male, age 62, unknown 33.7
Lateral hypothalamic area
nTPM: 38.5
2228 Male, age 66, unknown 42.4
1791 Male, age 80, right hemisphere 39.7
2271 Male, age 75, both hemispheres 36.8
2412 Male, age 62, unknown 35.3
Mammillary body
nTPM: 37.3
1948 Female, age 72, unknown 41.4
1923 Female, age 72, unknown 38.9
1945 Male, age 80, right hemisphere 35.9
2413 Male, age 66, unknown 35.9
1834 Female, age 42, unknown 34.6
Paraventricular nucleus
nTPM: 45.6
2700 Male, age 62, unknown 45.6
Preoptic area
nTPM: 39.9
1907 Male, age 80, right hemisphere 42.7
1861 Female, age 42, unknown 41.7
2414 Female, age 72, unknown 35.2
Supraoptic nucleus
nTPM: 36.5
2835 Female, age 72, unknown 37.6
1894 Female, age 72, unknown 36.5
2043 Male, age 62, unknown 35.4
Ventromedial nucleus
nTPM: 38.7
1822 Female, age 42, unknown 39.7
1982 Female, age 72, unknown 37.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 13.1
Samples: 257

Max nTPM: 34.6
Min nTPM: 3.7
Std nTPM: 4.5
Median nTPM: 12.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 34.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 29.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 26.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 25.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 25.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 24.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 23.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 22.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 22.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 21.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 21.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 21.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 21.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 21.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 21.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 21.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 21.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 20.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 20.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 20.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 19.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 19.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 19.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 19.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 19.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 19.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 19.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 19.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 18.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 18.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 18.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 18.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 18.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 18.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 18.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 17.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 17.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 17.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 17.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 17.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 17.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 17.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 17.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 16.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 16.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 16.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 16.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 16.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 16.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 16.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 16.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 16.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 16.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 16.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 15.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 15.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 15.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 15.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 15.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 15.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 15.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 15.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 15.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 15.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 15.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 15.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 15.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 15.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 15.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 15.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 15.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 15.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 15.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 15.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 14.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 14.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 14.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 14.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 14.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 14.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 14.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 14.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 14.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 14.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 14.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 14.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 14.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 14.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 14.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 14.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 14.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 14.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 13.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 13.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 13.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 13.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 13.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 13.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 13.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 13.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 13.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 13.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 13.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 13.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 13.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 13.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 13.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 13.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 13.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 13.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 13.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 13.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 13.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 13.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 13.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 13.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 12.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 12.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 12.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 12.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 12.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 12.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 12.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 12.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 12.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 12.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 12.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 12.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 12.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 12.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 12.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 12.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 12.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 12.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 12.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 12.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 12.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 12.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 12.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 12.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 12.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 12.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 12.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 12.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 12.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 12.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 11.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 11.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 11.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 11.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 11.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 11.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 11.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 11.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 11.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 11.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 11.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 11.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 11.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 11.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 11.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 11.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 11.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 11.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 11.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 11.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 11.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 11.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 11.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 10.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 10.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 10.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 10.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 10.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 10.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 10.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 10.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 10.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 10.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 10.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 10.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 10.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 10.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 10.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 10.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 10.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 10.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 10.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 10.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 10.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 10.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 10.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 10.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 10.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 10.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 10.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 9.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 9.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 9.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 9.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 9.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 9.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 9.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 9.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 9.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 9.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 9.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 9.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 9.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 9.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 9.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 9.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 9.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 9.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 9.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 8.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 8.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 8.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 8.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 8.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 8.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 8.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 8.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 8.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 8.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 8.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 7.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 7.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 7.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 7.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 7.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 7.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 7.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 7.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 7.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 7.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 7.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 7.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 7.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 6.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 6.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 6.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 6.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 6.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 6.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 6.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 6.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 6.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 5.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 5.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 5.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 5.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 4.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 4.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 4.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 4.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 3.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 41.8
Samples: 4

Max nTPM: 51.7
Min nTPM: 36.3
Sample A Female 51.7
Sample B Female 40.3
Sample C Male 38.7
Sample D Male 36.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 29.2
Samples: 4

Max nTPM: 30.6
Min nTPM: 26.9
Sample A Male 30.2
Sample B Male 26.9
Sample C Female 30.6
Sample D Female 29.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.0
69838741 Antisense, RP_050321_03_D10, Mouse strain C57BL/6J (56 days, male) 4.0

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