A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.8
nTPM
Monaco:
181.3
nTPM
Schmiedel:
44.7
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
71.8
HPA sample
nTPM
Classical monocyte nTPM: 71.8
Samples: 6
Max nTPM: 89.0
Min nTPM: 53.7
P10809_1003
89.0
P10809_1020
80.8
P10809_1039
83.5
P10809_1058
53.7
P10809_1080
60.6
P10809_1107
63.0
Intermediate monocyte nTPM: 57.6
Samples: 6
Max nTPM: 75.7
Min nTPM: 45.8
P10809_1004
66.4
P10809_1023
55.8
P10809_1042
55.5
P10809_1061
75.7
P10809_1081
45.8
P10809_1108
46.2
Non-classical monocyte nTPM: 43.3
Samples: 5
Max nTPM: 54.7
Min nTPM: 30.7
P10809_1005
49.7
P10809_1053
54.7
P10809_1072
41.3
P10809_1082
30.7
P10809_1109
40.3
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
181.3
Monaco sample
nTPM
Classical monocyte nTPM: 181.3
Samples: 4
Max nTPM: 209.2
Min nTPM: 150.3
RHH5313_R3680
209.2
RHH5221_R3593
198.1
RHH5250_R3622
167.8
RHH5279_R3651
150.3
Intermediate monocyte nTPM: 141.3
Samples: 4
Max nTPM: 162.5
Min nTPM: 121.2
RHH5314_R3681
162.5
RHH5222_R3594
121.2
RHH5251_R3623
125.4
RHH5280_R3652
156.2
Non-classical monocyte nTPM: 157.2
Samples: 4
Max nTPM: 179.0
Min nTPM: 122.7
RHH5315_R3682
122.7
RHH5223_R3595
179.0
RHH5252_R3624
164.0
RHH5281_R3653
163.1
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
44.7
Schmiedel sample id
TPM
Classical monocyte TPM: 39.2
Samples: 91
Max TPM: 66.0
Min TPM: 21.7
MONOCYTES_1
66.0
MONOCYTES_2
56.9
MONOCYTES_3
55.0
MONOCYTES_4
52.2
MONOCYTES_5
51.4
MONOCYTES_6
51.3
MONOCYTES_7
51.2
MONOCYTES_8
51.0
MONOCYTES_9
50.7
MONOCYTES_10
50.5
MONOCYTES_11
48.9
MONOCYTES_12
48.4
MONOCYTES_13
48.3
MONOCYTES_14
47.9
MONOCYTES_15
47.7
MONOCYTES_16
47.5
MONOCYTES_17
47.5
MONOCYTES_18
47.3
MONOCYTES_19
46.3
MONOCYTES_20
46.0
MONOCYTES_21
45.6
MONOCYTES_22
45.5
MONOCYTES_23
45.0
MONOCYTES_24
44.6
MONOCYTES_25
44.5
MONOCYTES_26
44.2
MONOCYTES_27
44.1
MONOCYTES_28
43.7
MONOCYTES_29
42.5
MONOCYTES_30
41.7
MONOCYTES_31
41.6
MONOCYTES_32
41.5
MONOCYTES_33
41.4
MONOCYTES_34
41.3
MONOCYTES_35
40.8
MONOCYTES_36
40.7
MONOCYTES_37
40.4
MONOCYTES_38
40.4
MONOCYTES_39
39.9
MONOCYTES_40
39.7
MONOCYTES_41
39.7
MONOCYTES_42
39.3
MONOCYTES_43
39.2
MONOCYTES_44
38.8
MONOCYTES_45
38.6
MONOCYTES_46
38.5
MONOCYTES_47
38.3
MONOCYTES_48
38.1
MONOCYTES_49
37.7
MONOCYTES_50
37.6
MONOCYTES_51
37.6
MONOCYTES_52
37.0
MONOCYTES_53
36.9
MONOCYTES_54
36.9
MONOCYTES_55
36.8
MONOCYTES_56
36.8
MONOCYTES_57
36.7
MONOCYTES_58
36.6
MONOCYTES_59
36.6
MONOCYTES_60
36.5
MONOCYTES_61
36.0
MONOCYTES_62
36.0
MONOCYTES_63
35.4
MONOCYTES_64
35.3
MONOCYTES_65
35.2
MONOCYTES_66
34.9
MONOCYTES_67
34.3
MONOCYTES_68
34.0
MONOCYTES_69
33.7
MONOCYTES_70
33.5
MONOCYTES_71
33.3
MONOCYTES_72
32.7
MONOCYTES_73
32.3
MONOCYTES_74
32.2
MONOCYTES_75
32.2
MONOCYTES_76
31.6
MONOCYTES_77
30.2
MONOCYTES_78
29.9
MONOCYTES_79
29.9
MONOCYTES_80
29.8
MONOCYTES_81
29.4
MONOCYTES_82
28.3
MONOCYTES_83
28.1
MONOCYTES_84
27.5
MONOCYTES_85
27.1
MONOCYTES_86
26.8
MONOCYTES_87
26.1
MONOCYTES_88
24.7
MONOCYTES_89
23.8
MONOCYTES_90
23.3
MONOCYTES_91
21.7
Show allShow less
Non-classical monocyte TPM: 44.7
Samples: 90
Max TPM: 70.8
Min TPM: 27.1
M2_1
70.8
M2_2
70.5
M2_3
69.2
M2_4
67.0
M2_5
65.3
M2_6
63.8
M2_7
62.6
M2_8
61.1
M2_9
60.1
M2_10
59.8
M2_11
57.5
M2_12
56.5
M2_13
55.7
M2_14
54.7
M2_15
52.6
M2_16
51.6
M2_17
51.4
M2_18
51.3
M2_19
51.3
M2_20
51.0
M2_21
51.0
M2_22
49.5
M2_23
48.9
M2_24
48.7
M2_25
48.5
M2_26
47.8
M2_27
47.3
M2_28
47.0
M2_29
46.9
M2_30
46.8
M2_31
46.5
M2_32
46.4
M2_33
46.0
M2_34
46.0
M2_35
45.9
M2_36
45.7
M2_37
45.7
M2_38
45.6
M2_39
45.3
M2_40
45.2
M2_41
44.6
M2_42
44.1
M2_43
43.6
M2_44
42.9
M2_45
42.7
M2_46
42.5
M2_47
42.4
M2_48
42.4
M2_49
42.3
M2_50
42.1
M2_51
42.0
M2_52
41.7
M2_53
41.4
M2_54
41.3
M2_55
41.0
M2_56
40.2
M2_57
40.0
M2_58
39.9
M2_59
39.8
M2_60
39.6
M2_61
39.5
M2_62
39.3
M2_63
38.9
M2_64
38.9
M2_65
38.8
M2_66
38.3
M2_67
38.1
M2_68
37.7
M2_69
37.6
M2_70
37.5
M2_71
37.3
M2_72
37.3
M2_73
37.2
M2_74
36.8
M2_75
36.5
M2_76
36.4
M2_77
35.6
M2_78
35.3
M2_79
35.3
M2_80
35.2
M2_81
35.1
M2_82
34.6
M2_83
33.0
M2_84
32.9
M2_85
32.8
M2_86
32.7
M2_87
32.2
M2_88
30.9
M2_89
27.4
M2_90
27.1
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
