A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.1
nTPM
Monaco:
122.9
nTPM
Schmiedel:
41.4
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
27.1
HPA sample
nTPM
Classical monocyte nTPM: 21.4
Samples: 6
Max nTPM: 26.4
Min nTPM: 18.9
P10809_1003
22.5
P10809_1020
18.9
P10809_1039
26.4
P10809_1058
22.0
P10809_1080
19.2
P10809_1107
19.5
Intermediate monocyte nTPM: 14.9
Samples: 6
Max nTPM: 16.6
Min nTPM: 11.9
P10809_1004
16.0
P10809_1023
11.9
P10809_1042
15.5
P10809_1061
15.3
P10809_1081
16.6
P10809_1108
14.1
Non-classical monocyte nTPM: 27.1
Samples: 5
Max nTPM: 57.0
Min nTPM: 16.9
P10809_1005
19.8
P10809_1053
23.7
P10809_1072
57.0
P10809_1082
16.9
P10809_1109
18.1
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
122.9
Monaco sample
nTPM
Classical monocyte nTPM: 123.0
Samples: 4
Max nTPM: 134.8
Min nTPM: 117.0
RHH5313_R3680
117.5
RHH5221_R3593
134.8
RHH5250_R3622
122.5
RHH5279_R3651
117.0
Intermediate monocyte nTPM: 72.1
Samples: 4
Max nTPM: 79.6
Min nTPM: 65.6
RHH5314_R3681
79.6
RHH5222_R3594
65.6
RHH5251_R3623
74.9
RHH5280_R3652
68.4
Non-classical monocyte nTPM: 100.5
Samples: 4
Max nTPM: 117.7
Min nTPM: 80.3
RHH5315_R3682
97.5
RHH5223_R3595
106.6
RHH5252_R3624
117.7
RHH5281_R3653
80.3
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
41.4
Schmiedel sample id
TPM
Classical monocyte TPM: 41.4
Samples: 91
Max TPM: 58.0
Min TPM: 27.5
MONOCYTES_1
58.0
MONOCYTES_2
55.4
MONOCYTES_3
54.7
MONOCYTES_4
53.5
MONOCYTES_5
53.4
MONOCYTES_6
51.9
MONOCYTES_7
51.9
MONOCYTES_8
51.0
MONOCYTES_9
50.9
MONOCYTES_10
49.2
MONOCYTES_11
49.1
MONOCYTES_12
48.8
MONOCYTES_13
48.8
MONOCYTES_14
48.7
MONOCYTES_15
48.7
MONOCYTES_16
47.0
MONOCYTES_17
47.0
MONOCYTES_18
46.8
MONOCYTES_19
46.8
MONOCYTES_20
46.5
MONOCYTES_21
46.5
MONOCYTES_22
46.3
MONOCYTES_23
46.2
MONOCYTES_24
46.1
MONOCYTES_25
45.6
MONOCYTES_26
45.5
MONOCYTES_27
45.5
MONOCYTES_28
44.2
MONOCYTES_29
43.8
MONOCYTES_30
43.7
MONOCYTES_31
43.6
MONOCYTES_32
43.6
MONOCYTES_33
43.5
MONOCYTES_34
43.2
MONOCYTES_35
42.9
MONOCYTES_36
42.6
MONOCYTES_37
42.2
MONOCYTES_38
41.5
MONOCYTES_39
41.4
MONOCYTES_40
41.2
MONOCYTES_41
41.2
MONOCYTES_42
41.0
MONOCYTES_43
40.9
MONOCYTES_44
40.9
MONOCYTES_45
40.6
MONOCYTES_46
40.4
MONOCYTES_47
40.4
MONOCYTES_48
40.0
MONOCYTES_49
40.0
MONOCYTES_50
39.9
MONOCYTES_51
39.8
MONOCYTES_52
39.6
MONOCYTES_53
39.5
MONOCYTES_54
39.5
MONOCYTES_55
39.4
MONOCYTES_56
39.3
MONOCYTES_57
39.1
MONOCYTES_58
39.1
MONOCYTES_59
38.8
MONOCYTES_60
38.7
MONOCYTES_61
38.7
MONOCYTES_62
38.7
MONOCYTES_63
38.5
MONOCYTES_64
38.0
MONOCYTES_65
37.7
MONOCYTES_66
37.4
MONOCYTES_67
37.3
MONOCYTES_68
37.1
MONOCYTES_69
37.1
MONOCYTES_70
36.5
MONOCYTES_71
36.2
MONOCYTES_72
36.0
MONOCYTES_73
36.0
MONOCYTES_74
35.5
MONOCYTES_75
35.5
MONOCYTES_76
34.8
MONOCYTES_77
34.8
MONOCYTES_78
34.6
MONOCYTES_79
34.6
MONOCYTES_80
34.5
MONOCYTES_81
33.9
MONOCYTES_82
33.8
MONOCYTES_83
33.7
MONOCYTES_84
33.6
MONOCYTES_85
33.5
MONOCYTES_86
32.6
MONOCYTES_87
32.2
MONOCYTES_88
31.6
MONOCYTES_89
31.0
MONOCYTES_90
29.3
MONOCYTES_91
27.5
Show allShow less
Non-classical monocyte TPM: 39.3
Samples: 90
Max TPM: 51.6
Min TPM: 25.1
M2_1
51.6
M2_2
51.1
M2_3
50.6
M2_4
50.5
M2_5
49.3
M2_6
48.6
M2_7
48.5
M2_8
47.8
M2_9
47.3
M2_10
46.9
M2_11
46.5
M2_12
46.5
M2_13
46.4
M2_14
46.0
M2_15
44.7
M2_16
44.6
M2_17
44.0
M2_18
43.9
M2_19
43.3
M2_20
43.3
M2_21
43.1
M2_22
42.5
M2_23
42.4
M2_24
42.4
M2_25
42.1
M2_26
42.0
M2_27
42.0
M2_28
41.7
M2_29
41.4
M2_30
41.0
M2_31
41.0
M2_32
40.9
M2_33
40.8
M2_34
40.7
M2_35
40.7
M2_36
40.7
M2_37
40.7
M2_38
40.6
M2_39
39.9
M2_40
39.8
M2_41
39.4
M2_42
39.3
M2_43
39.2
M2_44
39.1
M2_45
39.1
M2_46
39.0
M2_47
38.9
M2_48
38.5
M2_49
38.4
M2_50
38.3
M2_51
38.3
M2_52
38.1
M2_53
38.0
M2_54
37.9
M2_55
37.6
M2_56
37.5
M2_57
37.0
M2_58
36.8
M2_59
36.7
M2_60
36.6
M2_61
36.4
M2_62
36.3
M2_63
36.3
M2_64
36.0
M2_65
36.0
M2_66
35.9
M2_67
35.6
M2_68
35.4
M2_69
35.3
M2_70
35.2
M2_71
34.5
M2_72
34.3
M2_73
34.2
M2_74
34.1
M2_75
34.0
M2_76
33.9
M2_77
33.7
M2_78
33.6
M2_79
33.5
M2_80
33.4
M2_81
33.3
M2_82
33.0
M2_83
32.5
M2_84
32.2
M2_85
30.9
M2_86
30.3
M2_87
30.2
M2_88
29.4
M2_89
28.8
M2_90
25.1
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
