We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
WHRN
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • WHRN
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:18.8 nTPM
HPA Brain:77.5 nTPM
GTEx:18.8 nTPM
Pig:11.4 nTPM
Mouse:6.0 nTPM
Allen mouse:2.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 32.9
1961 Female, age 42, unknown 38.2
2226 Male, age 75, left hemisphere 27.5
Dorsomedial nucleus
nTPM: 43.0
2017 Female, age 42, unknown 54.9
2041 Female, age 72, unknown 42.4
1989 Male, age 62, unknown 31.8
Lateral hypothalamic area
nTPM: 43.9
2412 Male, age 62, unknown 49.8
2228 Male, age 66, unknown 49.2
1791 Male, age 80, right hemisphere 42.4
2271 Male, age 75, both hemispheres 34.1
Mammillary body
nTPM: 44.9
1945 Male, age 80, right hemisphere 67.6
1948 Female, age 72, unknown 49.1
1834 Female, age 42, unknown 47.5
2413 Male, age 66, unknown 36.8
1923 Female, age 72, unknown 23.7
Paraventricular nucleus
nTPM: 77.5
2700 Male, age 62, unknown 77.5
Preoptic area
nTPM: 51.3
2414 Female, age 72, unknown 71.9
1861 Female, age 42, unknown 45.7
1907 Male, age 80, right hemisphere 36.5
Supraoptic nucleus
nTPM: 48.9
2835 Female, age 72, unknown 60.5
2043 Male, age 62, unknown 53.4
1894 Female, age 72, unknown 32.9
Ventromedial nucleus
nTPM: 40.1
1982 Female, age 72, unknown 40.8
1822 Female, age 42, unknown 39.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 18.8
Samples: 257

Max nTPM: 57.2
Min nTPM: 6.3
Std nTPM: 6.5
Median nTPM: 17.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 57.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 40.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 40.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 39.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 37.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 35.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 35.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 33.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 31.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 31.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 31.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 31.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 30.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 30.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 28.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 28.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 28.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 28.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 28.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 28.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 27.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 27.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 27.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 27.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 27.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 27.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 27.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 26.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 26.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 26.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 26.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 26.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 26.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 26.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 26.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 26.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 25.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 25.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 25.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 25.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 24.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 24.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 24.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 24.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 24.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 23.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 23.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 23.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 23.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 23.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 23.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 23.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 23.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 22.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 22.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 22.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 22.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 22.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 22.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 22.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 22.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 22.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 22.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 22.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 22.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 22.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 22.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 21.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 21.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 21.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 21.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 21.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 21.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 20.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 20.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 20.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 20.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 20.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 20.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 20.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 20.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 20.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 20.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 19.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 19.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 19.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 19.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 19.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 19.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 19.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 19.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 19.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 19.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 19.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 19.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 19.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 19.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 19.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 19.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 19.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 19.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 19.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 18.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 18.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 18.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 18.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 18.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 18.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 18.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 18.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 18.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 18.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 18.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 18.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 18.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 18.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 18.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 18.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 18.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 18.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 18.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 18.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 18.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 18.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 18.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 18.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 17.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 17.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 17.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 17.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 17.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 17.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 17.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 17.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 17.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 17.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 17.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 17.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 17.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 17.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 17.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 17.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 17.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 17.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 17.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 16.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 16.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 16.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 16.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 16.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 16.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 16.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 16.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 16.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 16.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 16.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 16.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 16.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 16.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 16.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 16.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 16.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 16.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 16.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 16.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 15.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 15.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 15.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 15.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 15.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 15.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 15.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 15.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 15.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 15.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 15.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 15.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 15.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 15.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 15.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 15.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 14.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 14.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 14.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 14.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 14.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 14.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 14.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 14.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 14.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 14.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 14.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 14.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 14.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 14.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 14.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 14.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 14.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 14.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 14.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 14.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 13.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 13.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 13.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 13.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 13.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 13.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 13.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 13.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 13.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 13.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 13.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 13.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 13.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 13.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 13.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 13.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 13.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 13.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 12.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 12.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 12.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 12.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 12.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 12.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 12.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 12.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 12.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 12.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 12.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 12.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 12.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 12.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 11.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 11.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 11.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 11.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 11.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 11.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 11.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 11.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 11.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 11.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 11.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 10.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 10.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 10.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 10.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 9.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 9.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 9.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 8.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 7.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 7.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 7.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 6.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 6.3
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 11.5
Samples: 4

Max nTPM: 15.1
Min nTPM: 9.9
Sample A Female 10.0
Sample B Female 15.1
Sample C Male 9.9
Sample D Male 10.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 6.1
Samples: 4

Max nTPM: 6.6
Min nTPM: 5.3
Sample A Male 6.5
Sample B Male 6.6
Sample C Female 5.8
Sample D Female 5.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.8
75198238 Antisense, RP_060502_03_H06, Mouse strain C57BL/6J (56 days, male) 3.0
77371813 Antisense, RP_070116_02_E01, Mouse strain C57BL/6J (56 days, male) 2.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo