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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:101.9 nTPM
HPA Brain:134.8 nTPM
GTEx:101.9 nTPM
Pig:77.2 nTPM
Mouse:118.5 nTPM
Allen mouse:5.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 133.3
2226 Male, age 75, left hemisphere 176.9
1961 Female, age 42, unknown 89.6
Dorsomedial nucleus
nTPM: 98.9
1989 Male, age 62, unknown 117.1
2041 Female, age 72, unknown 94.9
2017 Female, age 42, unknown 84.6
Lateral hypothalamic area
nTPM: 134.8
1791 Male, age 80, right hemisphere 161.8
2228 Male, age 66, unknown 146.7
2271 Male, age 75, both hemispheres 140.5
2412 Male, age 62, unknown 90.2
Mammillary body
nTPM: 103.5
1923 Female, age 72, unknown 139.4
2413 Male, age 66, unknown 116.0
1945 Male, age 80, right hemisphere 94.9
1948 Female, age 72, unknown 88.8
1834 Female, age 42, unknown 78.5
Paraventricular nucleus
nTPM: 86.2
2700 Male, age 62, unknown 86.2
Preoptic area
nTPM: 98.7
1907 Male, age 80, right hemisphere 118.4
2414 Female, age 72, unknown 91.5
1861 Female, age 42, unknown 86.1
Supraoptic nucleus
nTPM: 105.5
1894 Female, age 72, unknown 113.6
2835 Female, age 72, unknown 108.3
2043 Male, age 62, unknown 94.7
Ventromedial nucleus
nTPM: 88.3
1982 Female, age 72, unknown 101.0
1822 Female, age 42, unknown 75.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 101.9
Samples: 257

Max nTPM: 220.6
Min nTPM: 56.9
Std nTPM: 26.2
Median nTPM: 98.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 220.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 215.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 189.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 184.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 182.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 177.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 161.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 159.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 148.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 148.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 147.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 146.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 146.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 146.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 144.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 143.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 142.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 141.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 141.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 140.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 140.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 138.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 138.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 138.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 137.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 136.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 135.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 135.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 134.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 132.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 131.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 131.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 131.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 131.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 129.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 129.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 129.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 126.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 126.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 126.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 125.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 124.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 124.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 124.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 123.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 123.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 123.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 122.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 122.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 120.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 120.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 120.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 118.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 118.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 118.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 118.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 117.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 117.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 116.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 116.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 116.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 116.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 116.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 115.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 115.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 115.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 115.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 115.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 114.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 113.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 113.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 113.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 113.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 113.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 112.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 112.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 112.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 111.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 110.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 110.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 109.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 109.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 109.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 108.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 108.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 108.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 108.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 108.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 107.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 107.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 107.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 107.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 107.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 106.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 106.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 106.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 105.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 105.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 105.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 104.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 104.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 104.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 104.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 104.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 104.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 103.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 103.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 103.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 103.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 102.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 102.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 102.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 101.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 101.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 101.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 101.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 100.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 100.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 100.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 100.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 100.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 99.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 99.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 99.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 99.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 99.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 98.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 98.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 98.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 98.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 98.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 98.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 97.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 97.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 97.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 97.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 96.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 96.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 95.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 95.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 95.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 95.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 95.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 94.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 94.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 94.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 94.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 94.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 93.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 93.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 93.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 93.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 93.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 93.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 92.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 92.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 92.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 92.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 91.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 91.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 91.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 90.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 90.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 90.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 90.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 90.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 89.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 88.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 88.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 88.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 88.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 88.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 87.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 87.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 87.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 87.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 87.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 86.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 85.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 85.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 85.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 84.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 84.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 84.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 84.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 83.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 83.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 83.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 83.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 83.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 83.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 83.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 82.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 82.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 82.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 82.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 82.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 81.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 81.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 81.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 81.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 81.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 81.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 80.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 80.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 80.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 79.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 79.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 79.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 79.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 78.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 78.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 78.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 78.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 77.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 77.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 77.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 77.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 77.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 77.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 76.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 75.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 75.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 75.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 75.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 75.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 75.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 74.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 73.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 73.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 73.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 73.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 73.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 73.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 72.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 71.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 70.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 70.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 70.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 69.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 68.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 68.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 68.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 68.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 68.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 67.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 66.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 66.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 66.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 63.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 63.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 61.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 60.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 60.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 59.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 58.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 56.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 77.2
Samples: 4

Max nTPM: 99.4
Min nTPM: 65.1
Sample A Female 99.4
Sample B Female 74.7
Sample C Male 69.5
Sample D Male 65.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 118.5
Samples: 4

Max nTPM: 126.8
Min nTPM: 112.5
Sample A Male 112.5
Sample B Male 126.8
Sample C Female 119.2
Sample D Female 115.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.6
393265 Antisense, RP_040809_01_B07, Mouse strain C57BL/6J (56 days, male) 5.6

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