On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
101.9
nTPM
HPA Brain:
135.4
nTPM
GTEx:
101.9
nTPM
Macaque:
62.0
nTPM
Mouse:
77.8
nTPM
Rat:
0.4
nTPM
Pig:
77.4
nTPM
HYPOTHALAMUS - SINGLE NUCLEI RNA EXPRESSIONi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NEURONSi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Unassigned AVP+
c-2
Excitatory (VGLUT2) TAC1+
c-3
Inhibitory (GAD1/2) AVP+
c-4
Unassigned AVP+
c-5
Excitatory (VGLUT2)
c-6
Excitatory (VGLUT2)
c-7
Inhibitory (GAD1/2) DRD2+ L...
c-8
Inhibitory (GAD1/2) ESR1+
c-9
Excitatory (VGLUT2)
c-10
Excitatory (VGLUT2) TAC1+
c-11
Inhibitory (GAD1/2) ESR1+
c-12
Inhibitory (GAD1/2) DRD1+ L...
c-13
Excitatory (VGLUT2)
c-14
Inhibitory (GAD1/2)
c-15
Excitatory (VGLUT2)
c-16
Excitatory (VGLUT2)
c-17
Inhibitory (GAD1/2)
c-18
Inhibitory (GAD1/2) GAL+
c-19
Excitatory (VGLUT1)
c-20
Excitatory (VGLUT2) ESR1+
c-21
Inhibitory (GAD1/2) DRD1+ L...
c-22
Inhibitory (GAD1/2) RORB+ K
c-23
Inhibitory (GAD1/2) SST+ NP
c-24
Inhibitory (GAD1/2) CXCL14+
c-25
Excitatory (VGLUT2)
c-26
Inhibitory (GAD1/2)
c-27
Excitatory (VGLUT2)
c-28
Unassigned
c-29
Inhibitory (GAD1/2) ESR1+
c-30
Excitatory (VGLUT2)
c-31
Excitatory (VGLUT1/2)
c-32
Inhibitory (GAD1/2) GAL+
c-33
Excitatory (VGLUT2)
c-34
Monoaminergic Inhibitory (G...
c-35
Excitatory (VGLUT2) TAC1+
c-36
Inhibitory (GAD1/2) LHX6+ T...
c-37
Excitatory (VGLUT2)
c-38
Inhibitory (GAD1/2) SST+
c-39
Inhibitory (GAD1/2) MEIS2+
c-40
Unassigned
c-41
Inhibitory (GAD1/2) SST+
c-42
Excitatory (VGLUT1)
c-43
Excitatory (VGLUT2) TAC1+
c-44
Unassigned AVP+
c-45
Inhibitory (GAD1/2) LAMP5+ ...
c-46
Excitatory (VGLUT2)
c-47
Inhibitory (GAD1/2) LHX6+ T...
c-48
Parvocellular CRH+ AVP+ OXT
c-49
Magnocellular TH+ AVP+ OXT+
c-50
Excitatory (VGLUT1)
c-51
Parvocellular (VGLUT2) AVP...
c-52
Inhibitory (GAD1/2) NOS1+ M...
c-53
Inhibitory (GAD1/2) TAC1+ D...
c-54
Inhibitory (GAD1/2) SST+
c-55
Excitatory (VGLUT1)
c-56
Excitatory (VGLUT1) ETV1+ Z...
c-57
HCRT+ RXF4+
c-58
Excitatory (VGLUT1/2) TAC1+
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NON-NEURONALi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Oligodendrocytes
c-2
Oligodendrocytes
c-3
Oligodendrocytes
c-4
Astrocytes (LHX2+)
c-5
Microglia
c-6
Oligodendrocytes
c-7
Astrocytes (CD44+)
c-8
Oligodendrocytes
c-9
Oligodendrocyte progenitor ...
c-10
Microglia
c-11
Oligodendrocytes
c-12
Astrocytes
c-13
Astrocytes (CD44+)
c-14
Oligodendrocyte progenitor ...
c-15
Oligodendrocyte progenitor ...
c-16
Microglia
c-17
Oligodendrocytes
c-18
Oligodendrocyte progenitor ...
c-19
Astrocytes
c-20
Fibroblasts
c-21
Oligodendrocytes
c-22
Oligodendrocytes
c-23
Ependymal cells
c-24
Vascular endothelial cells
c-25
Astrocytes (LHX2+)
c-26
Macrophages
c-27
Astrocytes
c-28
T-cells
c-29
Vascular smooth muscle cell
c-30
Fibroblasts (BNC2+ KCNMA1+ ...
c-31
Pericytes
c-32
Oligodendrocyte progenitor ...
c-33
Immature oligodendrocytes
c-34
Oligodendrocyte progenitor ...
c-35
NK-cells
c-36
Mural cells
c-37
Monocytes
c-38
Fibroblasts (BNC2+ TRPM3+)
c-39
Lymphocytes
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
135.4
Sample id
Sample description
nTPM
Arcuate nucleus nTPM: 133.7
2226
Male, age 75, left hemisphere
177.5
1961
Female, age 42, unknown
90.0
Dorsomedial nucleus nTPM: 99.3
1989
Male, age 62, unknown
117.6
2041
Female, age 72, unknown
95.3
2017
Female, age 42, unknown
84.9
Lateral hypothalamic area nTPM: 135.4
1791
Male, age 80, right hemisphere
162.8
2228
Male, age 66, unknown
147.3
2271
Male, age 75, both hemispheres
141.0
2412
Male, age 62, unknown
90.6
Mammillary body nTPM: 104.0
1923
Female, age 72, unknown
139.9
2413
Male, age 66, unknown
116.5
1945
Male, age 80, right hemisphere
95.5
1948
Female, age 72, unknown
89.1
1834
Female, age 42, unknown
78.8
Paraventricular nucleus nTPM: 86.5
2700
Male, age 62, unknown
86.5
Preoptic area nTPM: 99.2
1907
Male, age 80, right hemisphere
119.2
2414
Female, age 72, unknown
91.9
1861
Female, age 42, unknown
86.4
Supraoptic nucleus nTPM: 105.9
1894
Female, age 72, unknown
114.0
2835
Female, age 72, unknown
108.6
2043
Male, age 62, unknown
95.0
Ventromedial nucleus nTPM: 88.6
1982
Female, age 72, unknown
101.5
1822
Female, age 42, unknown
75.8
HYPOTHALAMUS - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
101.9
GTEx sample id
Sample description
nTPM
Brain - Hypothalamus Average nTPM: 101.9
Samples: 257
Max nTPM: 220.6
Min nTPM: 56.9
Std nTPM: 26.2
Median nTPM: 98.5
GTEX-1A3MX-0011-R8a-SM-7P8PI
60-69 years, male
220.6
GTEX-X261-0011-R8A-SM-4E3I5
50-59 years, male
215.2
GTEX-1RLM8-0011-R8a-SM-EYYXR
50-59 years, male
189.9
GTEX-11ZUS-0011-R8a-SM-5BC73
30-39 years, male
184.1
GTEX-1C6WA-0011-R8b-SM-7P8S7
60-69 years, male
182.6
GTEX-1B8L1-0011-R8b-SM-7P8ST
60-69 years, male
177.5
GTEX-1N2EF-0011-R8a-SM-F6481
60-69 years, male
161.2
GTEX-15EO6-0011-R8a-SM-H6Q6R
50-59 years, male
159.1
GTEX-WHSE-0011-R8A-SM-3P5Z1
20-29 years, male
148.3
GTEX-11O72-0011-R8a-SM-GJ3R9
40-49 years, male
148.2
GTEX-117YW-0011-R8a-SM-GINAB
50-59 years, male
147.2
GTEX-1LSNL-0011-R8b-SM-F2TAH
50-59 years, male
146.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E
60-69 years, male
146.5
GTEX-11GSO-0011-R8b-SM-GJ3PM
60-69 years, male
146.4
GTEX-12696-0011-R8a-SM-GINAP
60-69 years, male
144.8
GTEX-T5JC-0011-R8A-SM-32PLM
20-29 years, male
143.6
GTEX-117XS-0011-R8b-SM-GHWOD
60-69 years, male
142.2
GTEX-1A8G6-0011-R8a-SM-7P8PD
60-69 years, male
141.9
GTEX-X585-0011-R8A-SM-46MUX
50-59 years, male
141.2
GTEX-16YQH-0011-R8a-SM-7DUFB
30-39 years, male
140.9
GTEX-1CB4J-0011-R8a-SM-9QEHU
60-69 years, male
140.8
GTEX-13X6K-0011-R8b-SM-5PNZ4
60-69 years, female
138.7
GTEX-1LH75-0011-R8b-SM-F2TB2
50-59 years, female
138.6
GTEX-145MH-0011-R8a-SM-5PNUL
50-59 years, male
138.2
GTEX-13NYB-0011-R8a-SM-5KM4R
40-49 years, male
137.7
GTEX-1B933-0011-R8a-SM-9QEGX
50-59 years, female
136.5
GTEX-11DXY-0011-R8a-SM-DO11M
60-69 years, male
135.2
GTEX-131XH-0011-R8a-SM-5EGLL
50-59 years, male
135.0
GTEX-13NYS-0011-R8a-SM-5MR5H
60-69 years, male
134.4
GTEX-1192X-0011-R8b-SM-DO11U
50-59 years, male
132.4
GTEX-1LVAO-0011-R8a-SM-F3K5J
60-69 years, male
131.6
GTEX-13QIC-0011-R8b-SM-5O9CV
60-69 years, female
131.4
GTEX-QVUS-0011-R8A-SM-3GAD7
60-69 years, female
131.3
GTEX-1F6IF-0011-R8a-SM-9OSX5
60-69 years, male
131.1
GTEX-11DZ1-0011-R8b-SM-DNZZI
50-59 years, male
129.6
GTEX-1313W-0011-R8a-SM-5DUVM
50-59 years, female
129.4
GTEX-1JN1M-0011-R8b-SM-F6485
60-69 years, female
129.4
GTEX-1GTWX-0011-R8a-SM-CE6RM
60-69 years, male
126.7
GTEX-1JMOU-0011-R8b-SM-F2TA9
60-69 years, female
126.4
GTEX-ZUA1-0011-R8b-SM-51MST
40-49 years, male
126.1
GTEX-13N1W-0011-R8a-SM-5MR56
70-79 years, male
125.2
GTEX-1B996-0011-R8b-SM-79OOS
60-69 years, male
124.9
GTEX-QVJO-0011-R8A-SM-447C7
60-69 years, female
124.3
GTEX-15RJE-0011-R8a-SM-H7OGM
40-49 years, male
124.1
GTEX-1R9PO-0011-R8a-SM-F2TA3
60-69 years, female
123.9
GTEX-13CIG-0011-R8b-SM-5LZX5
50-59 years, male
123.4
GTEX-WL46-0011-R8B-SM-H7OHG
50-59 years, male
123.4
GTEX-1P4AB-0011-R8a-SM-F341R
50-59 years, male
122.8
GTEX-14C5O-0011-R8a-SM-5YYAG
60-69 years, male
122.0
GTEX-1F88E-0011-R8a-SM-CJI2H
60-69 years, female
120.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ
50-59 years, male
120.6
GTEX-WZTO-0011-R8A-SM-4E3II
40-49 years, male
120.1
GTEX-Z93S-0011-R8a-SM-4RGNL
50-59 years, male
118.7
GTEX-S7SE-0011-R8A-SM-F649T
50-59 years, male
118.4
GTEX-1MJK2-0011-R8a-SM-F341I
50-59 years, male
118.3
GTEX-1F75W-0011-R8a-SM-9QEI4
60-69 years, male
118.1
GTEX-NL4W-0011-R8a-SM-2I3G4
50-59 years, male
117.8
GTEX-1HCU6-0011-R8a-SM-CJI3R
60-69 years, female
117.2
GTEX-13SLX-0011-R8b-SM-5PNWZ
50-59 years, female
116.9
GTEX-1O9I2-0011-R8a-SM-F2TAX
50-59 years, male
116.7
GTEX-11DYG-0011-R8a-SM-DO93F
60-69 years, male
116.5
GTEX-1F48J-0011-R8a-SM-9OSWW
50-59 years, female
116.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6
60-69 years, male
116.3
GTEX-111FC-0011-R8b-SM-GI4VS
60-69 years, male
115.3
GTEX-11OF3-0011-R8b-SM-57WCS
60-69 years, male
115.2
GTEX-13O3Q-0011-R8b-SM-5KM2J
50-59 years, male
115.1
GTEX-1LSVX-0011-R8a-SM-F2TB3
60-69 years, male
115.1
GTEX-ZAK1-0011-R8a-SM-H7OGE
50-59 years, female
115.1
GTEX-15ER7-0011-R8a-SM-7KUL2
20-29 years, female
114.5
GTEX-13OW5-0011-R8a-SM-5L3GQ
60-69 years, male
113.9
GTEX-12WSA-0011-R8a-SM-5P9EX
60-69 years, male
113.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ
60-69 years, male
113.6
GTEX-1H1DG-0011-R8a-SM-CL54Z
70-79 years, male
113.6
GTEX-1HT8W-0011-R8b-SM-CM2SX
30-39 years, male
113.2
GTEX-1GF9V-0011-R8b-SM-CE6RB
60-69 years, male
112.7
GTEX-1IKK5-0011-R8b-SM-CJI45
60-69 years, male
112.4
GTEX-1EMGI-0011-R8b-SM-9QEID
60-69 years, male
112.1
GTEX-1E1VI-0011-R8b-SM-ARU8E
50-59 years, male
111.3
GTEX-13OVH-0011-R8b-SM-5MR35
70-79 years, male
110.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS
50-59 years, male
110.9
GTEX-1LKK1-0011-R8a-SM-F341O
50-59 years, female
109.9
GTEX-17HG3-0011-R8a-SM-79OK7
30-39 years, female
109.4
GTEX-1GMR8-0011-R8a-SM-CKZNX
50-59 years, female
109.0
GTEX-13RTJ-0011-R8b-SM-5O9DL
60-69 years, male
108.9
GTEX-14BMV-0011-R8a-SM-G9ERM
50-59 years, male
108.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT
50-59 years, male
108.3
GTEX-1GN73-0011-R8b-SM-CKZNY
60-69 years, male
108.2
GTEX-RVPV-0011-R8A-SM-F21II
60-69 years, male
108.1
GTEX-14JIY-0011-R8a-SM-6AJAP
60-69 years, male
107.7
GTEX-11H98-0011-R8a-SM-5NQ8V
50-59 years, male
107.6
GTEX-1HFI6-0011-R8a-SM-ARZLP
40-49 years, male
107.5
GTEX-11NV4-0011-R8b-SM-GHWO4
60-69 years, male
107.4
GTEX-1399T-0011-R8b-SM-5IJD8
60-69 years, male
107.0
GTEX-1RQEC-0011-R8b-SM-F648X
60-69 years, male
106.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C
50-59 years, male
106.8
GTEX-17HII-0011-R8a-SM-79OK6
50-59 years, male
106.3
GTEX-11WQK-0011-R8a-SM-5BC7C
50-59 years, male
105.8
GTEX-15SHU-0011-R8a-SM-H6Q7V
40-49 years, female
105.2
GTEX-RNOR-0011-R8A-SM-EZ6MN
50-59 years, female
105.2
GTEX-13FXS-0011-R8a-SM-5J1MN
50-59 years, male
104.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG
60-69 years, female
104.7
GTEX-15CHQ-0011-R8b-SM-CNPO4
60-69 years, male
104.5
GTEX-11TTK-0011-R8b-SM-DO111
60-69 years, female
104.2
GTEX-15DYW-0011-R8b-SM-GRR3B
60-69 years, female
104.2
GTEX-1KD4Q-0011-R8a-SM-F341N
40-49 years, male
104.1
GTEX-1I1CD-0011-R8b-SM-CJI3X
60-69 years, female
103.9
GTEX-13OW6-0011-R8a-SM-5L3GF
50-59 years, male
103.8
GTEX-1N2DW-0011-R8a-SM-EY5YD
50-59 years, male
103.6
GTEX-145LU-0011-R8b-SM-5PNZG
50-59 years, male
103.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA
70-79 years, male
102.5
GTEX-1MCQQ-0011-R8b-SM-F341H
60-69 years, male
102.5
GTEX-YFC4-0011-R8a-SM-4SOK3
40-49 years, female
102.4
GTEX-11DXW-0011-R8a-SM-GIN8T
40-49 years, male
101.7
GTEX-1GF9W-0011-R8b-SM-9QEIR
60-69 years, male
101.7
GTEX-14PJO-0011-R8a-SM-6AJAL
60-69 years, male
101.5
GTEX-1GN1U-0011-R8a-SM-CL537
50-59 years, female
101.3
GTEX-13OVJ-0011-R8b-SM-5L3FS
50-59 years, female
100.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J
60-69 years, male
100.6
GTEX-13FLV-0011-R8a-SM-5LZZE
50-59 years, male
100.5
GTEX-1HGF4-0011-R8b-SM-CKZP9
60-69 years, male
100.3
GTEX-13G51-0011-R8b-SM-5LZZ4
60-69 years, male
100.1
GTEX-12ZZX-0011-R8a-SM-5DUW8
40-49 years, female
99.9
GTEX-13OW7-0011-R8b-SM-5L3HR
50-59 years, male
99.9
GTEX-144GL-0011-R8a-SM-5Q5B1
50-59 years, male
99.9
GTEX-1C6VR-0011-R8b-SM-7MXUF
60-69 years, male
99.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW
50-59 years, male
99.1
GTEX-1HB9E-0011-R8b-SM-A9G1O
50-59 years, male
98.9
GTEX-14E7W-0011-R8b-SM-GQ1D6
70-79 years, male
98.7
GTEX-1A8G7-0011-R8a-SM-7P8S6
60-69 years, male
98.5
GTEX-14DAQ-0011-R8a-SM-G9ERP
60-69 years, female
98.4
GTEX-13JVG-0011-R8a-SM-5KM3E
60-69 years, male
98.3
GTEX-1RDX4-0011-R8a-SM-G8LLT
50-59 years, female
98.1
GTEX-1B8SG-0011-R8b-SM-7IGNW
50-59 years, male
97.6
GTEX-1GN2E-0011-R8a-SM-CE6RK
60-69 years, male
97.5
GTEX-1IY9M-0011-R8a-SM-EYYWW
60-69 years, male
97.5
GTEX-14PN4-0011-R8a-SM-6EU1H
50-59 years, male
97.0
GTEX-1NV5F-0011-R8b-SM-F647Z
60-69 years, female
96.5
GTEX-12126-0011-R8a-SM-GI4WV
20-29 years, male
96.2
GTEX-13VXU-0011-R8b-SM-GJ3RR
50-59 years, male
95.7
GTEX-1JMPZ-0011-R8b-SM-F341A
30-39 years, male
95.6
GTEX-1QMI2-0011-R8a-SM-F3429
60-69 years, male
95.3
GTEX-17EVQ-0011-R8a-SM-7189T
70-79 years, male
95.1
GTEX-1CB4H-0011-R8b-SM-CJI26
60-69 years, female
95.0
GTEX-14ASI-0011-R8b-SM-5S2UB
60-69 years, male
94.7
GTEX-18465-0011-R8b-SM-7LG6O
50-59 years, male
94.7
GTEX-1F6I4-0011-R8a-SM-9QEIA
60-69 years, male
94.6
GTEX-16Z82-0011-R8a-SM-7DUEX
60-69 years, male
94.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4
60-69 years, male
94.2
GTEX-13X6I-0011-R8a-SM-5PNZF
60-69 years, male
93.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE
40-49 years, female
93.9
GTEX-1QEPI-0011-R8a-SM-G8LLI
60-69 years, female
93.6
GTEX-14BIL-0011-R8b-SM-69LQK
50-59 years, male
93.3
GTEX-NPJ8-0011-R8a-SM-2HMLG
40-49 years, male
93.3
GTEX-1MA7X-0011-R8a-SM-G9EQD
60-69 years, male
93.1
GTEX-OXRN-0011-R8A-SM-E9TI1
50-59 years, male
92.8
GTEX-1N2EE-0011-R8a-SM-F3K4X
60-69 years, male
92.7
GTEX-1JJEA-0011-R8a-SM-F3419
60-69 years, male
92.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO
40-49 years, male
92.4
GTEX-132Q8-0011-R8b-SM-5DUWX
60-69 years, male
91.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT
50-59 years, male
91.7
GTEX-16NPV-0011-R8a-SM-7EPH8
50-59 years, female
91.4
GTEX-1HBPH-0011-R8b-SM-CL556
40-49 years, female
90.9
GTEX-11ZTS-0011-R8a-SM-57WDI
60-69 years, female
90.6
GTEX-1IDJH-0011-R8b-SM-ARZLL
70-79 years, male
90.3
GTEX-17F97-0011-R8a-SM-7DUET
50-59 years, male
90.2
GTEX-X4XX-0011-R8B-SM-46MWM
60-69 years, male
90.1
GTEX-1BAJH-0011-R8a-SM-7MXUB
70-79 years, male
89.7
GTEX-14PQA-0011-R8b-SM-6AJAB
50-59 years, female
88.7
GTEX-17EVP-0011-R8b-SM-7DUF9
40-49 years, male
88.6
GTEX-13X6J-0011-R8b-SM-5PNUA
50-59 years, male
88.2
GTEX-ZVZQ-0011-R8a-SM-51MR5
60-69 years, female
88.2
GTEX-14PJM-0011-R8b-SM-69LPD
50-59 years, female
88.1
GTEX-13OVL-0011-R8a-SM-5L3HH
50-59 years, male
87.9
GTEX-WVLH-0011-R8A-SM-3MJFC
50-59 years, male
87.9
GTEX-1KANB-0011-R8a-SM-F3K5N
50-59 years, male
87.8
GTEX-T6MN-0011-R8A-SM-32QP3
50-59 years, male
87.5
GTEX-1I1GS-0011-R8b-SM-CKZPE
60-69 years, male
87.3
GTEX-1PPGY-0011-R8a-SM-F649R
60-69 years, male
86.5
GTEX-13FLW-0011-R8b-SM-5J1MZ
50-59 years, male
85.7
GTEX-11ONC-0011-R8b-SM-5NQ87
60-69 years, male
85.5
GTEX-16XZZ-0011-R8b-SM-7LT8S
60-69 years, male
85.1
GTEX-1GZHY-0011-R8b-SM-9OSWK
50-59 years, female
84.6
GTEX-1H1CY-0011-R8b-SM-CJI31
60-69 years, female
84.4
GTEX-11GS4-0011-R8b-SM-GI4XA
60-69 years, male
84.1
GTEX-12WSM-0011-R8a-SM-5DUWJ
60-69 years, male
84.0
GTEX-13NZA-0011-R8b-SM-5KM2Q
60-69 years, male
83.6
GTEX-1PWST-0011-R8a-SM-F3K5P
70-79 years, male
83.6
GTEX-ZAB4-0011-R8b-SM-4SOKF
40-49 years, male
83.6
GTEX-1445S-0011-R8a-SM-5PNWX
60-69 years, male
83.5
GTEX-1GZ4I-0011-R8b-SM-9WG76
50-59 years, male
83.3
GTEX-QDT8-0011-R8A-SM-G8W63
30-39 years, female
83.3
GTEX-1RQED-0011-R8a-SM-G8LKO
60-69 years, male
83.1
GTEX-12WSD-0011-R8b-SM-9QEGI
60-69 years, female
82.8
GTEX-P44H-0011-R8A-SM-2XCEL
40-49 years, male
82.8
GTEX-139TS-0011-R8a-SM-5J1NP
60-69 years, male
82.7
GTEX-14753-0011-R8b-SM-5S2U1
60-69 years, male
82.7
GTEX-11WQC-0011-R8b-SM-57WCH
60-69 years, male
82.3
GTEX-QMR6-0011-R8A-SM-32PKJ
50-59 years, male
81.8
GTEX-13SLW-0011-R8b-SM-5SI64
70-79 years, male
81.4
GTEX-1H3O1-0011-R8a-SM-CL555
60-69 years, male
81.4
GTEX-13PDP-0011-R8b-SM-5O9CS
60-69 years, male
81.2
GTEX-ZYY3-0011-R8a-SM-H7OHF
60-69 years, female
81.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K
50-59 years, female
81.0
GTEX-ZXG5-0011-R8a-SM-57WD1
60-69 years, male
80.8
GTEX-1F52S-0011-R8a-SM-9OSXA
60-69 years, female
80.2
GTEX-145LS-0011-R8b-SM-5PNXA
60-69 years, female
80.1
GTEX-1CB4G-0011-R8b-SM-9WG7H
60-69 years, male
79.8
GTEX-1KWVE-0011-R8a-SM-F3K4V
30-39 years, male
79.8
GTEX-1C64N-0011-R8b-SM-7MGXE
50-59 years, male
79.4
GTEX-X4XY-0011-R8A-SM-46MVC
60-69 years, male
79.2
GTEX-1LVA9-0011-R8a-SM-F3K5G
50-59 years, male
78.9
GTEX-13CF2-0011-R8b-SM-5IJCX
60-69 years, male
78.8
GTEX-1HSKV-0011-R8a-SM-CL54X
60-69 years, male
78.6
GTEX-1JMQK-0011-R8a-SM-G8LMS
60-69 years, male
78.1
GTEX-15G19-0011-R8b-SM-7KUL1
60-69 years, male
77.9
GTEX-1JN6P-0011-R8a-SM-F6499
60-69 years, male
77.9
GTEX-15DCD-0011-R8b-SM-7KUEF
70-79 years, female
77.8
GTEX-1R9K4-0011-R8b-SM-F649L
60-69 years, male
77.6
GTEX-16GPK-0011-R8a-SM-79OMQ
60-69 years, male
77.3
GTEX-ZDXO-0011-R8a-SM-4WWD7
60-69 years, male
77.3
GTEX-1R46S-0011-R8a-SM-F3K4Q
60-69 years, female
76.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ
60-69 years, male
75.9
GTEX-1B8SF-0011-R8b-SM-7P8SX
60-69 years, male
75.6
GTEX-147F4-0011-R8b-SM-5S2UN
50-59 years, male
75.3
GTEX-11EI6-0011-R8a-SM-DO93M
60-69 years, male
75.1
GTEX-1N5O9-0011-R8a-SM-F649C
60-69 years, male
75.0
GTEX-PWO3-0011-R8A-SM-2I5GD
60-69 years, female
75.0
GTEX-11ZU8-0011-R8b-SM-GHWOM
60-69 years, male
74.3
GTEX-1F75A-0011-R8a-SM-CL539
50-59 years, male
73.9
GTEX-1HCVE-0011-R8a-SM-ARU7A
50-59 years, male
73.8
GTEX-1I1HK-0011-R8b-SM-E8VN9
60-69 years, male
73.8
GTEX-13OW8-0011-R8a-SM-5L3G5
60-69 years, male
73.7
GTEX-1CAMQ-0011-R8a-SM-ARU85
40-49 years, male
73.4
GTEX-WWYW-0011-R8A-SM-3NB3S
50-59 years, female
73.1
GTEX-1CAV2-0011-R8a-SM-GRR24
40-49 years, female
72.3
GTEX-N7MS-0011-R8a-SM-2YUMK
60-69 years, male
71.2
GTEX-XMD1-0011-R8A-SM-4AT48
60-69 years, male
70.3
GTEX-14LZ3-0011-R8b-SM-COH3M
60-69 years, female
70.2
GTEX-1POEN-0011-R8b-SM-F647O
30-39 years, female
70.1
GTEX-ZVT3-0011-R8b-SM-57WDJ
60-69 years, female
69.3
GTEX-ZF28-0011-R8a-SM-4WWFW
60-69 years, male
68.5
GTEX-11EMC-0011-R8b-SM-DO91Z
60-69 years, female
68.4
GTEX-1QP6S-0011-R8a-SM-F649M
40-49 years, male
68.4
GTEX-1H23P-0011-R8b-SM-A9G1G
60-69 years, male
68.2
GTEX-11GSP-0011-R8b-SM-5NQ79
60-69 years, female
68.0
GTEX-1RAZS-0011-R8a-SM-F2TBI
50-59 years, male
67.5
GTEX-1477Z-0011-R8b-SM-5S2RG
60-69 years, male
66.9
GTEX-1E2YA-0011-R8a-SM-CKZNG
50-59 years, male
66.7
GTEX-1HBPI-0011-R8a-SM-A9G1S
50-59 years, male
66.5
GTEX-1GN1V-0011-R8a-SM-CKZNV
60-69 years, male
63.4
GTEX-13O3O-0011-R8b-SM-5LUAL
60-69 years, female
63.2
GTEX-13QJC-0011-R8b-SM-5S2U6
60-69 years, female
61.7
GTEX-131XW-0011-R8a-SM-5DUWY
50-59 years, female
60.3
GTEX-1IKOH-0011-R8a-SM-A9SKG
60-69 years, female
60.3
GTEX-13112-0011-R8b-SM-664OV
50-59 years, male
59.8
GTEX-YJ89-0011-R8b-SM-4SOK8
60-69 years, male
58.9
GTEX-1OJC4-0011-R8a-SM-F3K5B
50-59 years, female
56.9
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HYPOTHALAMUS - Macaque RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
62.0
Macaque sample
Sample description
nTPM
Preoptic area nTPM: 62.0
Samples: 1
Max nTPM: 62.0
Min nTPM: 62.0
Sample A
62.0
HYPOTHALAMUS - Pig RNA-seqi
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
77.4
Pig sample
Sample description
nTPM
Hypothalamus nTPM: 77.5
Samples: 4
Max nTPM: 99.9
Min nTPM: 65.3
Sample A
Female
99.9
Sample B
Female
74.9
Sample C
Male
69.7
Sample D
Male
65.3
HYPOTHALAMUS - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
77.8
Mouse sample
Sample description
nTPM
Hypothalamus nTPM: 77.8
Samples: 4
Max nTPM: 79.1
Min nTPM: 75.5
Sample A
77.6
Sample B
78.9
Sample C
75.5
Sample D
79.1
HYPOTHALAMUS - Rat RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.4
Rat sample
Sample description
nTPM
Hypothalamus nTPM: 0.4
Samples: 4
Max nTPM: 0.5
Min nTPM: 0.2
Sample A
0.3
Sample A
0.5
Sample A
0.5
Sample A
0.2
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The Human Protein Atlas project is funded
