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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
355.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 355.8
Samples: 105
Max nTPM: 655.0
Min nTPM: 98.3
Std nTPM: 115.6
Median nTPM:
377_1
82 years, female
655.0
163_1
78 years, male
602.8
320_1
89 years, female
575.2
376_1
75 years, female
572.2
322_1
76 years, male
548.4
321_1
62 years, female
533.4
319_1
81 years, male
533.0
251_1
78 years, male
530.9
293_1
68 years, female
526.3
292_1
71 years, male
508.9
406_1
79 years, male
500.4
316_1
62 years, male
496.9
425_1
59 years, female
495.0
394_1
75 years, female
491.3
153_1
70 years, female
491.2
503_1
68 years, male
487.3
246_1
77 years, male
484.9
517_1
88 years, male
482.8
189_1
76 years, male
477.2
2_1
77 years, female
455.4
405_1
91 years, male
449.6
353_1
82 years, female
448.6
264_1
73 years, female
447.3
335_1
73 years, female
447.0
518_1
75 years, female
442.9
291_1
76 years, male
429.9
254_1
77 years, female
425.8
229_1
69 years, female
424.0
495_1
57 years, female
423.3
384_1
83 years, male
421.6
318_1
68 years, male
419.8
389_1
86 years, female
416.0
217_1
76 years, male
413.5
295_1
61 years, female
413.4
452_1
88 years, female
407.1
348_1
84 years, male
407.0
286_1
68 years, female
406.7
265_1
87 years, male
406.1
126_1
63 years, male
402.4
404_1
82 years, female
396.0
288_1
66 years, female
394.1
468_1
89 years, male
391.5
526_1
61 years, male
391.4
18_1
88 years, male
389.3
480_1
63 years, male
388.8
466_1
57 years, female
387.3
352_1
62 years, male
371.9
499_1
55 years, female
366.4
414_1
84 years, female
364.8
177_1
74 years, male
362.3
237_1
82 years, male
360.8
17_1
71 years, male
360.7
81_1
67 years, male
358.3
349_1
83 years, male
353.7
6_1
73 years, female
350.1
413_1
59 years, female
347.6
137_1
83 years, male
346.9
350_1
84 years, female
345.8
172_1
72 years, female
345.6
4_1
88 years, female
345.3
354_1
81 years, female
338.3
311_1
78 years, male
336.2
351_1
91 years, male
321.9
386_1
76 years, male
318.9
501_1
88 years, male
318.0
115_1
83 years, male
315.0
145_1
84 years, male
311.9
218_1
71 years, female
306.3
35_1
74 years, female
306.1
139_1
64 years, female
300.7
379_1
60 years, male
297.3
266_1
85 years, male
291.9
307_1
66 years, female
291.8
396_1
62 years, male
290.4
324_1
76 years, male
288.4
314_1
67 years, male
287.8
243_1
75 years, male
286.0
9_1
66 years, female
281.7
356_1
87 years, female
269.2
415_1
77 years, female
265.7
43_1
64 years, female
264.8
355_1
70 years, female
262.0
506_1
65 years, male
258.8
149_1
88 years, male
255.7
375_1
74 years, female
253.2
308_1
70 years, female
252.3
173_1
67 years, male
251.6
313_1
79 years, female
247.8
32_1
67 years, male
237.1
315_1
62 years, female
236.2
447_1
81 years, male
233.7
162_1
79 years, female
228.7
109_1
81 years, female
221.5
317_1
60 years, male
220.8
120_1
70 years, female
205.6
142_1
61 years, female
187.2
117_1
61 years, male
185.9
41_1
94 years, female
180.6
89_1
63 years, male
160.6
42_1
85 years, male
160.2
491_1
89 years, female
145.1
347_1
72 years, male
131.7
490_1
67 years, female
128.8
119_1
70 years, female
112.1
99_1
64 years, male
98.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.