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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:283.5 nTPM
HPA Brain:245.4 nTPM
GTEx:283.5 nTPM
Pig:175.8 nTPM
Mouse:113.6 nTPM
Allen mouse:3.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

245.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 219.6
1961 Female, age 42, unknown 255.7
2226 Male, age 75, left hemisphere 183.5
Dorsomedial nucleus
nTPM: 206.2
2041 Female, age 72, unknown 229.0
2017 Female, age 42, unknown 204.3
1989 Male, age 62, unknown 185.3
Lateral hypothalamic area
nTPM: 201.1
1791 Male, age 80, right hemisphere 228.0
2228 Male, age 66, unknown 218.3
2271 Male, age 75, both hemispheres 182.2
2412 Male, age 62, unknown 175.8
Mammillary body
nTPM: 176.7
1945 Male, age 80, right hemisphere 188.8
1948 Female, age 72, unknown 188.7
1834 Female, age 42, unknown 179.7
1923 Female, age 72, unknown 163.6
2413 Male, age 66, unknown 162.6
Paraventricular nucleus
nTPM: 198.0
2700 Male, age 62, unknown 198.0
Preoptic area
nTPM: 220.4
1907 Male, age 80, right hemisphere 244.6
1861 Female, age 42, unknown 221.8
2414 Female, age 72, unknown 194.8
Supraoptic nucleus
nTPM: 200.2
2043 Male, age 62, unknown 206.9
2835 Female, age 72, unknown 198.4
1894 Female, age 72, unknown 195.2
Ventromedial nucleus
nTPM: 245.4
1822 Female, age 42, unknown 247.8
1982 Female, age 72, unknown 243.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

283.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 283.5
Samples: 257

Max nTPM: 571.5
Min nTPM: 74.0
Std nTPM: 77.6
Median nTPM: 288.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 571.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 531.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 526.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 468.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 455.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 453.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 453.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 427.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 409.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 408.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 407.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 407.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 403.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 401.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 388.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 388.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 387.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 385.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 383.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 383.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 382.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 381.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 379.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 378.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 377.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 377.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 376.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 371.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 370.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 367.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 367.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 366.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 365.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 363.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 363.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 360.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 357.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 357.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 354.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 353.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 350.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 349.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 349.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 346.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 344.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 344.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 342.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 340.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 339.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 338.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 338.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 336.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 335.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 335.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 334.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 334.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 334.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 333.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 333.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 331.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 330.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 329.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 329.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 329.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 328.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 327.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 327.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 326.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 324.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 321.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 320.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 319.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 319.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 318.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 318.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 316.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 315.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 314.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 314.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 314.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 313.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 313.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 313.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 313.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 312.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 311.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 311.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 311.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 311.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 310.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 310.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 309.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 309.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 309.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 309.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 309.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 309.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 307.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 307.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 307.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 307.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 306.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 306.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 306.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 306.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 304.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 303.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 301.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 299.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 298.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 297.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 296.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 296.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 296.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 296.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 295.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 294.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 294.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 293.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 293.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 292.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 291.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 291.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 290.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 289.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 288.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 288.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 288.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 288.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 287.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 286.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 285.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 285.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 285.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 284.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 283.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 282.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 280.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 279.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 279.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 278.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 278.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 277.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 276.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 276.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 275.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 274.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 272.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 271.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 270.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 268.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 268.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 268.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 267.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 267.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 267.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 266.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 266.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 266.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 265.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 265.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 265.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 265.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 265.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 264.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 262.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 262.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 261.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 261.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 258.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 258.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 258.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 257.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 255.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 254.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 253.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 253.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 252.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 251.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 249.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 248.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 247.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 247.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 246.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 246.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 244.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 243.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 243.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 243.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 242.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 240.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 239.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 237.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 237.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 237.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 236.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 235.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 234.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 234.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 233.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 233.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 230.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 228.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 228.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 227.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 227.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 227.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 226.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 225.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 225.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 223.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 223.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 220.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 219.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 219.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 217.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 216.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 213.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 211.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 211.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 207.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 206.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 203.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 203.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 201.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 200.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 197.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 194.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 194.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 190.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 188.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 187.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 187.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 185.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 181.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 176.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 174.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 169.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 167.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 163.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 161.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 157.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 156.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 142.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 142.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 135.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 125.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 121.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 117.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 117.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 111.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 106.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 99.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 82.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 79.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 74.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 74.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

175.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 175.8
Samples: 4

Max nTPM: 200.1
Min nTPM: 153.3
Sample A Female 163.2
Sample B Female 200.1
Sample C Male 186.7
Sample D Male 153.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 113.5
Samples: 4

Max nTPM: 134.8
Min nTPM: 91.6
Sample A Male 134.8
Sample B Male 126.6
Sample C Female 91.6
Sample D Female 101.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.7
69548958 Antisense, RP_050426_02_F05, Mouse strain C57BL/6J (56 days, male) 3.7

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