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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • HCN2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:190.3 nTPM
GTEx:93.5 nTPM
FANTOM5:41.9 Scaled Tags Per Million
Pig:119.2 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

190.3
Sample id Sample description nTPM
Putamen
nTPM: 190.3
2489 Female, age 72, unknown 252.9
2647 Male, age 75, left hemisphere 215.6
1829 Male, age 74, unknown 208.2
2466 Female, age 79, unknown 191.0
1937 Female, age 91, right hemisphere 171.3
1838 Male, age 80, right hemisphere 148.6
2482 Female, age 94, left hemisphere 144.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 93.5
Samples: 254

Max nTPM: 213.2
Min nTPM: 8.1
Std nTPM: 37.8
Median nTPM: 95.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 213.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 183.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 178.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 172.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 167.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 166.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 165.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 162.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 160.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 160.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 159.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 158.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 156.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 154.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 154.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 151.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 150.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 149.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 148.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 148.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 147.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 146.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 146.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 146.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 145.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 144.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 144.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 144.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 143.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 142.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 142.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 138.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 138.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 137.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 135.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 135.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 134.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 134.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 134.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 132.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 131.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 130.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 130.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 128.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 128.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 127.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 125.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 124.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 124.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 123.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 123.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 123.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 123.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 122.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 122.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 122.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 121.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 121.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 121.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 120.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 120.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 120.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 120.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 119.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 119.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 118.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 118.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 118.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 117.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 116.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 115.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 115.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 113.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 113.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 113.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 113.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 113.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 112.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 112.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 111.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 111.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 111.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 110.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 110.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 109.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 109.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 109.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 109.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 109.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 108.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 108.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 108.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 107.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 107.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 107.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 106.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 106.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 106.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 105.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 104.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 104.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 104.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 104.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 103.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 103.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 103.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 102.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 102.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 102.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 100.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 100.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 99.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 99.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 99.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 98.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 98.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 98.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 98.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 98.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 97.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 97.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 97.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 97.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 96.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 95.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 95.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 95.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 95.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 94.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 94.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 93.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 92.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 92.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 91.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 91.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 91.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 90.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 90.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 90.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 89.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 89.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 89.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 88.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 88.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 88.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 88.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 88.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 87.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 87.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 87.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 86.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 86.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 86.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 85.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 85.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 84.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 83.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 83.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 83.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 83.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 82.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 82.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 81.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 81.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 80.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 80.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 80.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 79.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 78.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 78.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 77.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 77.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 77.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 77.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 75.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 75.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 75.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 75.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 75.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 74.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 74.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 74.1
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 72.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 71.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 71.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 69.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 69.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 67.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 67.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 66.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 66.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 65.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 65.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 64.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 62.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 62.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 61.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 61.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 61.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 60.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 60.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 59.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 55.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 54.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 54.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 53.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 52.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 52.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 52.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 51.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 51.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 50.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 50.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 49.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 49.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 48.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 48.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 47.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 47.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 46.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 46.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 45.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 44.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 44.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 43.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 43.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 41.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 41.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 40.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 40.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 40.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 40.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 38.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 36.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 36.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 34.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 34.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 33.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 32.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 31.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 30.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 29.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 28.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 26.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 26.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 26.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 23.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 23.4
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 22.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 17.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 16.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 15.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 8.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

41.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 41.9
FF:10176-103C5 60 years, female 41.9

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

119.2
Pig sample Sample description nTPM
Putamen
nTPM: 119.2
Samples: 3

Max nTPM: 150.6
Min nTPM: 91.1
Sample B Female 91.1
Sample C Male 150.6
Sample D Male 115.8

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