HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:244.6 nTPM
HPA Brain:270.5 nTPM
GTEx:244.6 nTPM
FANTOM5:130.7 Scaled Tags Per Million
Pig:151.6 nTPM
Mouse:124.4 nTPM
Allen mouse:10.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041713Antibody HPA049578
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 270.5
Sample id Sample description nTPM
Hippocampus
nTPM: 270.5
2621 Female, age 67, right hemisphere 336.4
2529 Female, age 94, left hemisphere 313.7
1911 Female, age 85, right hemisphere 274.3
2148 Female, age 91, left hemisphere 257.6
1898 Male, age 80, left hemisphere 225.0
1855 Male, age 76, left hemisphere 215.9
Dentate gyrus
nTPM: 228.4
2531 Female, age 67, both hemispheres 342.3
1927 Female, age 91, both hemispheres 237.2
2528 Male, age 74, both hemispheres 209.2
2530 Female, age 94, left hemisphere 206.3
2246 Female, age 85, both hemispheres 192.6
2010 Male, age 76, both hemispheres 182.5
Entorhinal gyrus
nTPM: 224.1
2686 Male, age 75, right hemisphere 254.8
2613 Female, age 94, left hemisphere 242.6
2764 Male, age 80, right hemisphere 230.3
1787 Male, age 76, left hemisphere 218.5
1938 Female, age 85, left hemisphere 207.3
2117 Female, age 91, right hemisphere 191.4
Hippocampus, CA1
nTPM: 216.4
2527 Male, age 74, both hemispheres 253.4
2749 Male, age 80, left hemisphere 233.4
1873 Female, age 85, both hemispheres 228.5
2082 Female, age 91, right hemisphere 185.4
2045 Male, age 76, both hemispheres 181.3
Hippocampus, CA2
nTPM: 208.9
1963 Male, age 80, left hemisphere 294.3
2113 Female, age 91, right hemisphere 220.8
2437 Female, age 94, left hemisphere 199.4
1940 Female, age 85, left hemisphere 181.6
1892 Male, age 76, both hemispheres 180.7
2249 Male, age 74, both hemispheres 176.7
Hippocampus, CA3
nTPM: 267.3
2861 Female, age 67, both hemispheres 402.1
2620 Female, age 94, left hemisphere 337.7
2137 Male, age 80, left hemisphere 294.2
1867 Male, age 76, both hemispheres 213.0
1891 Female, age 85, both hemispheres 195.1
2436 Male, age 74, both hemispheres 161.3
Parahippocampal cortex
nTPM: 220.9
2245 Female, age 91, both hemispheres 290.4
2622 Female, age 67, right hemisphere 282.9
2532 Female, age 72, left hemisphere 227.4
1933 Female, age 85, both hemispheres 217.6
2250 Female, age 67, right hemisphere 212.2
2692 Male, age 74, both hemispheres 205.7
2018 Male, age 76, both hemispheres 204.3
2693 Female, age 94, both hemispheres 199.1
1850 Male, age 80, both hemispheres 187.0
1990 Female, age 91, right hemisphere 182.8
Perirhinal gyrus
nTPM: 215.5
1794 Male, age 80, right hemisphere 237.7
2521 Female, age 94, right hemisphere 220.3
1847 Female, age 91, left hemisphere 218.4
1841 Female, age 85, right hemisphere 208.9
2848 Male, age 76, right hemisphere 192.4
Subiculum
nTPM: 191.8
2619 Male, age 74, both hemispheres 225.3
2729 Female, age 91, right hemisphere 207.6
2042 Male, age 76, both hemispheres 190.6
1901 Male, age 80, both hemispheres 187.9
1977 Female, age 85, both hemispheres 185.4
2438 Female, age 94, left hemisphere 153.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 244.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 244.6
Samples: 255

Max nTPM: 798.1
Min nTPM: 45.9
Std nTPM: 123.2
Median nTPM: 224.1
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 798.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 711.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 673.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 618.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 609.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 540.2
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 521.5
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 510.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 509.5
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 508.6
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 501.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 130.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 130.7
FF:10153-102I9 76 years, female 167.0
FF:10169-103B7 60 years, female 94.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 151.6
Pig sample Sample description nTPM
Subiculum
nTPM: 117.8
Samples: 4

Max nTPM: 160.4
Min nTPM: 92.5
Sample A Female 160.4
Sample B Female 104.7
Sample C Male 113.7
Sample D Male 92.5
Dorsal hippocampus
nTPM: 101.6
Samples: 4

Max nTPM: 116.0
Min nTPM: 86.0
Sample A Female 116.0
Sample B Female 112.9
Sample C Male 86.0
Sample D Male 91.4
Entorhinal cortex
nTPM: 151.6
Samples: 4

Max nTPM: 200.1
Min nTPM: 120.2
Sample A Female 156.9
Sample B Female 120.2
Sample C Male 200.1
Sample D Male 129.0
Ventral hippocampus
nTPM: 102.9
Samples: 4

Max nTPM: 132.2
Min nTPM: 72.1
Sample A Female 72.1
Sample B Female 81.5
Sample C Male 132.2
Sample D Male 125.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 124.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 124.4
Samples: 4

Max nTPM: 131.2
Min nTPM: 118.0
Sample A Male 131.2
Sample B Male 123.0
Sample C Female 118.0
Sample D Female 125.3
Hippocampal formation
nTPM: 98.6
Samples: 4

Max nTPM: 112.3
Min nTPM: 79.2
Sample A Male 109.4
Sample B Male 93.5
Sample C Female 79.2
Sample D Female 112.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
69059956 Antisense, RP_050317_04_G04, Mouse strain C57BL/6J (56 days, male) 10.1

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