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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:106.8 nTPM
HPA Brain:136.1 nTPM
GTEx:106.8 nTPM
Pig:51.2 nTPM
Mouse:43.6 nTPM
Allen mouse:6.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 127.6
1961 Female, age 42, unknown 152.4
2226 Male, age 75, left hemisphere 102.9
Dorsomedial nucleus
nTPM: 125.3
1989 Male, age 62, unknown 149.5
2017 Female, age 42, unknown 118.3
2041 Female, age 72, unknown 108.0
Lateral hypothalamic area
nTPM: 99.0
1791 Male, age 80, right hemisphere 121.9
2271 Male, age 75, both hemispheres 109.3
2412 Male, age 62, unknown 106.1
2228 Male, age 66, unknown 58.8
Mammillary body
nTPM: 89.6
1834 Female, age 42, unknown 95.4
1945 Male, age 80, right hemisphere 90.9
1948 Female, age 72, unknown 89.0
1923 Female, age 72, unknown 87.2
2413 Male, age 66, unknown 85.2
Paraventricular nucleus
nTPM: 86.6
2700 Male, age 62, unknown 86.6
Preoptic area
nTPM: 107.9
1861 Female, age 42, unknown 131.8
1907 Male, age 80, right hemisphere 97.5
2414 Female, age 72, unknown 94.3
Supraoptic nucleus
nTPM: 125.2
2043 Male, age 62, unknown 131.4
2835 Female, age 72, unknown 131.0
1894 Female, age 72, unknown 113.2
Ventromedial nucleus
nTPM: 136.1
1982 Female, age 72, unknown 136.3
1822 Female, age 42, unknown 135.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 106.8
Samples: 257

Max nTPM: 354.1
Min nTPM: 35.5
Std nTPM: 37.1
Median nTPM: 99.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 354.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 275.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 252.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 241.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 207.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 184.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 181.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 177.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 176.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 171.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 169.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 169.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 167.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 166.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 158.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 157.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 156.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 156.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 155.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 154.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 153.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 152.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 152.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 151.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 151.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 150.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 149.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 148.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 148.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 147.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 147.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 146.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 145.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 143.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 142.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 142.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 141.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 141.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 141.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 140.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 139.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 138.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 138.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 137.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 137.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 137.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 136.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 134.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 133.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 133.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 131.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 130.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 130.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 130.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 129.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 129.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 129.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 129.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 128.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 127.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 125.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 125.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 124.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 123.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 123.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 123.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 122.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 122.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 121.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 120.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 119.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 119.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 118.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 117.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 117.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 117.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 116.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 116.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 116.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 116.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 116.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 115.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 115.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 114.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 114.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 114.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 113.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 113.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 113.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 112.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 112.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 112.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 111.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 111.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 111.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 110.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 110.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 109.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 109.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 109.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 109.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 109.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 108.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 108.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 107.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 107.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 105.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 105.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 105.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 105.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 104.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 104.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 103.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 103.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 102.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 102.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 102.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 102.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 102.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 101.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 101.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 101.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 101.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 101.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 101.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 100.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 100.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 99.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 99.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 99.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 99.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 98.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 98.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 98.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 98.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 98.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 98.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 97.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 97.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 95.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 95.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 95.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 95.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 95.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 95.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 94.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 94.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 94.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 94.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 94.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 93.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 93.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 93.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 93.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 92.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 92.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 92.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 92.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 92.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 92.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 92.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 92.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 92.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 92.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 92.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 91.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 91.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 91.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 90.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 90.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 90.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 89.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 89.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 89.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 89.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 88.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 88.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 88.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 87.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 87.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 87.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 87.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 87.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 86.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 86.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 85.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 85.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 84.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 84.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 84.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 83.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 83.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 83.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 82.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 82.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 82.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 82.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 82.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 81.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 81.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 81.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 80.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 80.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 80.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 80.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 80.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 79.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 79.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 78.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 78.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 77.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 77.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 77.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 77.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 76.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 76.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 76.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 75.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 75.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 75.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 74.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 74.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 73.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 73.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 72.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 72.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 71.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 71.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 71.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 70.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 70.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 70.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 69.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 68.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 68.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 68.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 67.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 67.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 65.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 65.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 64.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 64.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 62.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 62.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 60.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 60.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 60.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 57.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 56.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 56.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 53.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 52.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 52.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 52.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 44.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 42.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 35.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 51.2
Samples: 4

Max nTPM: 65.3
Min nTPM: 40.9
Sample A Female 65.3
Sample B Female 48.1
Sample C Male 50.5
Sample D Male 40.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 43.6
Samples: 4

Max nTPM: 48.7
Min nTPM: 37.6
Sample A Male 48.7
Sample B Male 44.9
Sample C Female 37.6
Sample D Female 43.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.0
69059956 Antisense, RP_050317_04_G04, Mouse strain C57BL/6J (56 days, male) 6.0

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