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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:4918.4 nTPM
HPA:4364.6 nTPM
GTEx:4918.4 nTPM
FANTOM5:640.4 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA003365Antibody HPA055361
Ovarian stroma cells LowNot detected





OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4364.6
overview
Female, age 64
Ovary sample 192
nTPM: 4168.4
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 5458.7
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 3950.7
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 3921.1
N/A
Female, age 16
Ovary sample 3663
nTPM: 6200.6
N/A
Female, age 20
Ovary sample 3664
nTPM: 3784.2
N/A
Female, age 32
Ovary sample 3665
nTPM: 3068.3

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4918.4
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 4918.4
Samples: 193

Max nTPM: 11697.0
Min nTPM: 1945.0
Std nTPM: 1467.1
Median nTPM: 4741.5
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 11697.0
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 9275.1
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 8887.7
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 8436.2
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 7918.6
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 7675.0
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 7646.5
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 7557.3
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 7490.6
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 7226.8
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 7153.6
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 7148.1
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 7074.5
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 7059.2
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 6930.6
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 6916.3
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 6898.8
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 6878.9
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 6867.0
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 6831.8
GTEX-183WM-1926-SM-72D5F 70-79 years, female 6782.7
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 6708.2
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 6695.9
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 6587.0
GTEX-QVJO-3126-SM-COH22 60-69 years, female 6554.9
GTEX-13SLX-2426-SM-664OM 50-59 years, female 6487.0
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 6468.5
GTEX-15EOM-1526-SM-68723 20-29 years, female 6409.5
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 6388.8
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 6387.6
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 6286.4
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 6269.5
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 6241.7
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 6198.3
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 6180.3
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 6131.9
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 6108.3
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 6091.8
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 6042.4
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 6022.2
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 6016.7
GTEX-RU72-2226-SM-46MUE 50-59 years, female 5999.6
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 5989.5
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 5988.8
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 5974.6
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 5932.7
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 5854.1
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 5819.1
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 5782.8
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 5759.7
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 5705.9
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 5686.7
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 5683.1
GTEX-11I78-1926-SM-59878 50-59 years, female 5673.6
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 5670.4
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 5554.9
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 5542.8
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 5525.8
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 5523.0
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 5506.2
GTEX-14BIN-1426-SM-664NI 50-59 years, female 5501.2
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 5495.7
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 5457.7
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 5437.4
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 5413.9
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 5383.3
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 5375.9
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 5351.3
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 5344.9
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 5328.9
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 5315.2
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 5307.3
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 5305.8
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 5302.9
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 5291.5
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 5283.7
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 5236.7
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 5208.5
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 5171.5
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 5146.0
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 5139.3
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 5101.5
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 5099.2
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 5086.2
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 5078.3
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 5010.8
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 4977.9
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 4977.5
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 4967.8
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 4936.2
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 4913.1
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 4896.7
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 4827.0
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 4810.8
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 4774.3
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 4751.8
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 4741.5
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 4733.0
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 4732.9
GTEX-S32W-1226-SM-4AD67 50-59 years, female 4732.0
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 4718.5
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 4708.1
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 4705.3
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 4687.1
GTEX-S341-0726-SM-4AD5R 40-49 years, female 4674.4
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 4645.0
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 4637.5
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 4632.3
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 4623.3
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 4599.2
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 4592.9
GTEX-P78B-1926-SM-3P616 40-49 years, female 4581.9
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 4573.8
GTEX-14PKV-1226-SM-6871T 20-29 years, female 4554.7
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 4531.8
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 4496.1
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 4455.1
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 4440.6
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 4437.3
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 4433.0
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 4414.8
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 4406.9
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 4386.5
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 4338.7
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 4328.5
GTEX-18D9A-0826-SM-718C1 30-39 years, female 4326.5
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 4320.7
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 4310.9
GTEX-QCQG-1426-SM-48U22 50-59 years, female 4298.5
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 4280.8
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 4272.8
GTEX-R45C-2526-SM-GRR28 60-69 years, female 4251.3
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 4192.7
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 4154.8
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 4129.3
GTEX-145ME-1226-SM-5MR87 40-49 years, female 4120.4
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 4119.0
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 4095.2
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 4081.7
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 4070.0
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 4057.6
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 4053.6
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 4044.7
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 4021.5
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 3996.0
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 3990.9
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 3985.3
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 3942.6
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 3841.3
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 3728.0
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 3724.5
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 3612.4
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 3600.4
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 3597.3
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 3590.7
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 3583.4
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 3550.5
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 3538.1
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 3520.1
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 3509.7
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 3468.5
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 3426.5
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 3426.0
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 3416.8
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 3412.7
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 3369.9
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 3360.0
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 3348.1
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 3310.7
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 3301.7
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 3234.0
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 3201.1
GTEX-Q734-0726-SM-48TZP 40-49 years, female 3143.2
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 3080.2
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 2931.3
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 2913.6
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 2882.7
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 2855.9
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2819.9
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 2800.5
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 2800.5
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 2792.5
GTEX-14JG6-0626-SM-68716 30-39 years, female 2752.2
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 2751.9
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 2712.0
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 2667.5
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2651.4
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 2545.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2510.9
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 2295.4
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 2260.8
GTEX-R55G-1526-SM-48FER 40-49 years, female 2001.9
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1945.0
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

640.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 640.4
FF:10020-101D2 47,75,84 years, female 640.4

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