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  • SNTA1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:83.0 nTPM
HPA Brain:111.3 nTPM
GTEx:83.0 nTPM
Pig:35.5 nTPM
Mouse:20.8 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 72.7
1961 Female, age 42, unknown 88.6
2226 Male, age 75, left hemisphere 56.8
Dorsomedial nucleus
nTPM: 109.2
1989 Male, age 62, unknown 142.2
2017 Female, age 42, unknown 96.6
2041 Female, age 72, unknown 88.9
Lateral hypothalamic area
nTPM: 70.5
1791 Male, age 80, right hemisphere 103.6
2412 Male, age 62, unknown 75.3
2271 Male, age 75, both hemispheres 64.7
2228 Male, age 66, unknown 38.2
Mammillary body
nTPM: 101.0
1945 Male, age 80, right hemisphere 124.5
1834 Female, age 42, unknown 107.7
2413 Male, age 66, unknown 95.9
1923 Female, age 72, unknown 89.5
1948 Female, age 72, unknown 87.3
Paraventricular nucleus
nTPM: 54.1
2700 Male, age 62, unknown 54.1
Preoptic area
nTPM: 95.5
1861 Female, age 42, unknown 127.7
2414 Female, age 72, unknown 87.5
1907 Male, age 80, right hemisphere 71.5
Supraoptic nucleus
nTPM: 111.3
1894 Female, age 72, unknown 123.7
2043 Male, age 62, unknown 114.0
2835 Female, age 72, unknown 96.3
Ventromedial nucleus
nTPM: 85.5
1982 Female, age 72, unknown 93.0
1822 Female, age 42, unknown 78.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 83.0
Samples: 257

Max nTPM: 231.5
Min nTPM: 19.6
Std nTPM: 34.1
Median nTPM: 77.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 231.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 179.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 177.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 173.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 169.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 167.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 158.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 157.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 156.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 154.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 153.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 149.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 147.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 145.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 145.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 144.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 142.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 141.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 138.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 137.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 137.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 137.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 136.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 135.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 135.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 134.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 133.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 132.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 132.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 131.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 130.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 128.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 126.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 124.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 124.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 123.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 123.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 123.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 122.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 122.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 121.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 121.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 121.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 119.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 117.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 117.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 116.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 114.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 114.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 113.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 109.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 108.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 107.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 107.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 107.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 105.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 105.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 104.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 104.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 102.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 102.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 102.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 101.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 101.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 100.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 98.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 98.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 98.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 98.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 97.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 96.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 95.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 95.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 95.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 95.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 95.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 94.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 93.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 93.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 92.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 92.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 91.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 91.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 90.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 90.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 90.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 89.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 88.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 88.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 88.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 88.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 87.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 85.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 85.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 85.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 85.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 84.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 84.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 84.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 84.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 83.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 83.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 83.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 83.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 83.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 83.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 82.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 82.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 82.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 81.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 81.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 80.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 80.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 80.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 79.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 79.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 79.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 79.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 78.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 78.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 78.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 78.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 78.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 78.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 78.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 77.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 77.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 77.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 77.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 77.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 77.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 75.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 75.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 75.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 74.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 74.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 74.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 74.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 74.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 73.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 73.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 73.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 73.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 73.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 73.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 73.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 71.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 71.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 71.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 71.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 71.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 71.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 70.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 70.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 70.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 70.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 70.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 69.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 68.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 68.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 68.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 67.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 67.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 66.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 66.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 66.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 66.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 65.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 65.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 65.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 64.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 64.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 64.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 64.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 64.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 63.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 63.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 63.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 63.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 62.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 62.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 62.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 62.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 61.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 61.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 60.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 60.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 60.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 60.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 59.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 59.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 59.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 59.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 59.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 58.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 58.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 57.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 57.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 56.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 56.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 56.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 55.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 55.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 55.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 54.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 54.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 54.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 54.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 53.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 53.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 53.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 52.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 52.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 51.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 50.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 50.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 49.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 49.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 49.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 49.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 49.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 48.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 47.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 47.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 46.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 45.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 44.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 44.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 44.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 43.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 43.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 42.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 42.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 42.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 41.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 41.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 41.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 40.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 40.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 40.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 40.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 39.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 39.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 39.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 38.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 38.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 38.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 37.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 36.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 35.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 35.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 33.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 32.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 31.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 28.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 26.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 19.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 35.5
Samples: 4

Max nTPM: 41.0
Min nTPM: 27.2
Sample A Female 40.6
Sample B Female 41.0
Sample C Male 33.3
Sample D Male 27.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 20.8
Samples: 4

Max nTPM: 23.2
Min nTPM: 18.4
Sample A Male 22.6
Sample B Male 23.2
Sample C Female 18.4
Sample D Female 18.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
70474011 Antisense, RP_050614_04_G02, Mouse strain C57BL/6J (56 days, male) 0.1

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