HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:120.6 nTPM
HPA Brain:87.4 nTPM
GTEx:120.6 nTPM
FANTOM5:118.0 Scaled Tags Per Million
Pig:97.8 nTPM
Mouse:167.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041401Antibody HPA051751
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 87.4
Sample id Sample description nTPM
Hippocampus
nTPM: 72.4
2529 Female, age 94, left hemisphere 83.6
2621 Female, age 67, right hemisphere 78.5
1898 Male, age 80, left hemisphere 77.6
1855 Male, age 76, left hemisphere 67.9
2148 Female, age 91, left hemisphere 66.8
1911 Female, age 85, right hemisphere 60.2
Dentate gyrus
nTPM: 65.7
2530 Female, age 94, left hemisphere 81.1
2246 Female, age 85, both hemispheres 69.0
2010 Male, age 76, both hemispheres 67.2
2531 Female, age 67, both hemispheres 61.4
1927 Female, age 91, both hemispheres 59.4
2528 Male, age 74, both hemispheres 56.2
Entorhinal gyrus
nTPM: 77.5
1938 Female, age 85, left hemisphere 83.2
2764 Male, age 80, right hemisphere 82.5
1787 Male, age 76, left hemisphere 75.4
2613 Female, age 94, left hemisphere 75.0
2686 Male, age 75, right hemisphere 74.5
2117 Female, age 91, right hemisphere 74.4
Hippocampus, CA1
nTPM: 74.1
2749 Male, age 80, left hemisphere 109.3
2527 Male, age 74, both hemispheres 78.2
1873 Female, age 85, both hemispheres 64.2
2082 Female, age 91, right hemisphere 61.4
2045 Male, age 76, both hemispheres 57.1
Hippocampus, CA2
nTPM: 69.2
1892 Male, age 76, both hemispheres 77.8
1940 Female, age 85, left hemisphere 71.0
2437 Female, age 94, left hemisphere 70.5
2249 Male, age 74, both hemispheres 68.0
1963 Male, age 80, left hemisphere 65.5
2113 Female, age 91, right hemisphere 62.7
Hippocampus, CA3
nTPM: 69.2
2137 Male, age 80, left hemisphere 89.5
1867 Male, age 76, both hemispheres 77.9
2436 Male, age 74, both hemispheres 68.5
2861 Female, age 67, both hemispheres 64.3
1891 Female, age 85, both hemispheres 60.8
2620 Female, age 94, left hemisphere 53.9
Parahippocampal cortex
nTPM: 78.1
1850 Male, age 80, both hemispheres 96.2
2245 Female, age 91, both hemispheres 89.2
2532 Female, age 72, left hemisphere 87.7
1990 Female, age 91, right hemisphere 77.5
2622 Female, age 67, right hemisphere 76.8
2250 Female, age 67, right hemisphere 74.8
1933 Female, age 85, both hemispheres 74.4
2018 Male, age 76, both hemispheres 72.1
2693 Female, age 94, both hemispheres 67.3
2692 Male, age 74, both hemispheres 65.5
Perirhinal gyrus
nTPM: 87.4
1794 Male, age 80, right hemisphere 99.9
1841 Female, age 85, right hemisphere 93.5
1847 Female, age 91, left hemisphere 88.8
2521 Female, age 94, right hemisphere 79.6
2848 Male, age 76, right hemisphere 75.0
Subiculum
nTPM: 69.8
2438 Female, age 94, left hemisphere 83.3
1901 Male, age 80, both hemispheres 78.1
1977 Female, age 85, both hemispheres 72.7
2042 Male, age 76, both hemispheres 68.7
2619 Male, age 74, both hemispheres 64.6
2729 Female, age 91, right hemisphere 51.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 120.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 120.6
Samples: 255

Max nTPM: 257.6
Min nTPM: 67.5
Std nTPM: 26.0
Median nTPM: 117.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 257.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 213.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 206.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 199.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 194.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 186.7
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 184.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 181.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 176.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 172.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 171.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 118.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 118.0
FF:10153-102I9 76 years, female 134.2
FF:10169-103B7 60 years, female 101.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 97.8
Pig sample Sample description nTPM
Subiculum
nTPM: 86.0
Samples: 4

Max nTPM: 109.9
Min nTPM: 77.1
Sample A Female 109.9
Sample B Female 78.2
Sample C Male 78.7
Sample D Male 77.1
Dorsal hippocampus
nTPM: 97.9
Samples: 4

Max nTPM: 121.1
Min nTPM: 71.4
Sample A Female 121.1
Sample B Female 92.5
Sample C Male 106.5
Sample D Male 71.4
Entorhinal cortex
nTPM: 96.9
Samples: 4

Max nTPM: 106.9
Min nTPM: 83.4
Sample A Female 104.6
Sample B Female 106.9
Sample C Male 92.8
Sample D Male 83.4
Ventral hippocampus
nTPM: 86.9
Samples: 4

Max nTPM: 102.6
Min nTPM: 67.0
Sample A Female 83.1
Sample B Female 67.0
Sample C Male 94.9
Sample D Male 102.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 167.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 165.1
Samples: 4

Max nTPM: 169.9
Min nTPM: 159.6
Sample A Male 168.1
Sample B Male 169.9
Sample C Female 162.9
Sample D Female 159.6
Hippocampal formation
nTPM: 167.3
Samples: 4

Max nTPM: 180.0
Min nTPM: 161.1
Sample A Male 164.9
Sample B Male 163.1
Sample C Female 180.0
Sample D Female 161.1

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