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  • RNF125
IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:15.5 nTPM
Monaco:40.3 nTPM
Schmiedel:167.3 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

15.5
HPA sample nTPM
NK-cell
nTPM: 15.5
Samples: 6

Max nTPM: 22.4
Min nTPM: 6.2
P10809_1013 14.8
P10809_1033 6.2
P10809_1052 15.1
P10809_1071 16.8
P10809_1093 17.6
P10809_1103 22.4

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

40.3
Monaco sample nTPM
NK-cell
nTPM: 40.3
Samples: 4

Max nTPM: 47.7
Min nTPM: 31.9
RHH5316_R3683 35.1
RHH5224_R3596 46.3
RHH5253_R3625 31.9
RHH5282_R3654 47.7

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

167.3
Schmiedel sample id TPM
NK-cell
TPM: 167.3
Samples: 90

Max TPM: 329.7
Min TPM: 102.3
NK_1 329.7
NK_2 265.0
NK_3 242.0
NK_4 239.5
NK_5 233.6
NK_6 232.6
NK_7 227.2
NK_8 226.7
NK_9 224.4
NK_10 217.6
NK_11 212.0
NK_12 209.9
NK_13 209.1
NK_14 208.8
NK_15 207.1
NK_16 200.1
NK_17 198.5
NK_18 197.5
NK_19 196.8
NK_20 195.6
NK_21 189.3
NK_22 188.3
NK_23 184.4
NK_24 184.0
NK_25 183.2
NK_26 182.7
NK_27 182.7
NK_28 178.8
NK_29 178.5
NK_30 178.2
NK_31 178.1
NK_32 177.5
NK_33 177.1
NK_34 176.1
NK_35 175.4
NK_36 172.9
NK_37 169.8
NK_38 169.1
NK_39 167.9
NK_40 163.1
NK_41 162.4
NK_42 161.9
NK_43 160.5
NK_44 159.8
NK_45 159.8
NK_46 159.1
NK_47 156.2
NK_48 156.0
NK_49 156.0
NK_50 155.3
NK_51 155.1
NK_52 155.0
NK_53 154.2
NK_54 153.5
NK_55 151.5
NK_56 150.9
NK_57 150.6
NK_58 150.4
NK_59 148.9
NK_60 148.8
NK_61 148.7
NK_62 148.7
NK_63 148.2
NK_64 147.8
NK_65 146.8
NK_66 146.5
NK_67 146.0
NK_68 143.7
NK_69 139.4
NK_70 138.7
NK_71 137.8
NK_72 137.5
NK_73 136.4
NK_74 135.8
NK_75 133.7
NK_76 132.4
NK_77 132.0
NK_78 130.0
NK_79 124.0
NK_80 123.8
NK_81 123.6
NK_82 121.5
NK_83 118.8
NK_84 118.0
NK_85 116.2
NK_86 114.7
NK_87 114.3
NK_88 113.5
NK_89 102.8
NK_90 102.3
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