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  • SUMMARY

  • TISSUE

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  • PLS3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:21.4 nTPM
HPA Brain:46.2 nTPM
GTEx:21.4 nTPM
Pig:35.7 nTPM
Mouse:102.2 nTPM
Allen mouse:1.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 19.8
2226 Male, age 75, left hemisphere 26.8
1961 Female, age 42, unknown 12.8
Dorsomedial nucleus
nTPM: 28.2
1989 Male, age 62, unknown 38.1
2017 Female, age 42, unknown 25.9
2041 Female, age 72, unknown 20.7
Lateral hypothalamic area
nTPM: 31.7
2228 Male, age 66, unknown 39.3
2271 Male, age 75, both hemispheres 37.0
1791 Male, age 80, right hemisphere 28.5
2412 Male, age 62, unknown 22.2
Mammillary body
nTPM: 46.2
1945 Male, age 80, right hemisphere 59.9
1834 Female, age 42, unknown 47.9
2413 Male, age 66, unknown 47.5
1923 Female, age 72, unknown 39.5
1948 Female, age 72, unknown 36.6
Paraventricular nucleus
nTPM: 24.3
2700 Male, age 62, unknown 24.3
Preoptic area
nTPM: 30.8
2414 Female, age 72, unknown 41.1
1861 Female, age 42, unknown 31.8
1907 Male, age 80, right hemisphere 19.5
Supraoptic nucleus
nTPM: 42.3
2043 Male, age 62, unknown 51.6
1894 Female, age 72, unknown 45.9
2835 Female, age 72, unknown 29.5
Ventromedial nucleus
nTPM: 12.3
1822 Female, age 42, unknown 12.4
1982 Female, age 72, unknown 12.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 21.4
Samples: 257

Max nTPM: 50.3
Min nTPM: 6.9
Std nTPM: 8.8
Median nTPM: 19.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 50.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 50.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 47.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 46.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 45.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 45.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 44.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 43.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 41.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 41.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 41.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 39.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 39.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 39.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 38.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 38.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 38.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 38.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 38.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 37.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 37.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 37.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 36.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 36.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 36.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 35.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 35.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 34.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 34.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 33.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 33.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 32.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 32.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 32.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 32.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 32.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 32.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 31.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 31.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 30.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 30.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 30.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 30.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 29.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 29.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 29.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 29.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 29.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 29.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 29.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 28.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 28.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 28.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 28.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 27.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 27.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 27.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 26.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 26.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 26.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 26.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 26.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 25.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 25.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 25.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 25.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 25.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 25.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 24.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 24.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 24.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 24.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 24.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 24.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 23.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 23.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 23.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 23.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 23.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 23.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 23.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 23.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 23.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 22.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 22.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 22.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 22.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 22.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 22.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 22.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 22.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 22.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 22.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 22.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 22.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 21.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 21.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 21.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 21.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 21.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 21.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 21.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 21.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 21.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 21.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 21.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 21.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 20.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 20.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 20.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 20.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 20.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 20.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 20.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 20.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 20.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 20.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 20.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 20.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 19.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 19.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 19.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 19.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 19.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 19.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 19.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 19.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 19.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 19.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 19.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 19.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 19.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 18.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 18.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 18.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 18.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 18.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 18.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 18.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 18.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 18.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 18.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 18.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 18.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 18.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 18.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 18.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 18.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 17.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 17.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 17.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 17.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 17.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 17.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 17.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 17.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 17.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 17.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 17.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 17.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 17.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 17.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 17.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 17.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 16.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 16.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 16.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 16.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 16.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 16.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 16.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 16.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 16.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 16.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 16.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 16.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 16.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 15.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 15.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 15.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 15.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 15.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 15.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 15.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 15.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 15.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 15.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 15.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 15.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 14.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 14.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 14.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 14.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 14.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 14.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 14.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 14.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 14.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 14.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 14.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 14.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 14.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 14.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 14.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 14.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 14.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 13.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 13.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 13.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 13.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 13.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 13.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 13.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 13.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 13.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 13.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 13.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 13.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 13.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 13.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 13.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 13.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 12.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 12.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 12.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 12.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 12.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 12.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 12.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 12.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 12.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 12.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 12.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 12.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 12.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 12.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 11.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 11.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 11.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 11.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 11.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 11.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 10.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 10.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 10.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 10.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 10.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 10.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 10.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 10.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 10.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 10.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 10.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 9.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 8.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 8.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 6.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 35.7
Samples: 4

Max nTPM: 40.7
Min nTPM: 27.7
Sample A Female 40.7
Sample B Female 38.6
Sample C Male 35.9
Sample D Male 27.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 102.2
Samples: 4

Max nTPM: 106.2
Min nTPM: 97.4
Sample A Male 106.2
Sample B Male 104.2
Sample C Female 100.9
Sample D Female 97.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.2
355886 Antisense, RP_040617_01_F04, Mouse strain C57BL/6J (56 days, male) 1.5
68269036 Antisense, RP_041208_01_E11, Mouse strain C57BL/6J (56 days, male) 0.8

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