HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:115.3 nTPM
HPA Brain:138.2 nTPM
GTEx:115.3 nTPM
FANTOM5:109.1 Scaled Tags Per Million
Pig:109.4 nTPM
Mouse:94.6 nTPM
Allen mouse:5.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048315
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 138.2
Sample id Sample description nTPM
Hippocampus
nTPM: 138.2
2621 Female, age 67, right hemisphere 159.7
2529 Female, age 94, left hemisphere 150.6
2148 Female, age 91, left hemisphere 142.4
1855 Male, age 76, left hemisphere 129.6
1898 Male, age 80, left hemisphere 128.2
1911 Female, age 85, right hemisphere 118.7
Dentate gyrus
nTPM: 125.4
2531 Female, age 67, both hemispheres 144.1
2530 Female, age 94, left hemisphere 140.1
2010 Male, age 76, both hemispheres 125.6
1927 Female, age 91, both hemispheres 125.2
2246 Female, age 85, both hemispheres 111.8
2528 Male, age 74, both hemispheres 105.7
Entorhinal gyrus
nTPM: 137.7
2613 Female, age 94, left hemisphere 152.4
1787 Male, age 76, left hemisphere 146.7
2686 Male, age 75, right hemisphere 142.4
2764 Male, age 80, right hemisphere 140.3
1938 Female, age 85, left hemisphere 127.9
2117 Female, age 91, right hemisphere 116.7
Hippocampus, CA1
nTPM: 118.7
2749 Male, age 80, left hemisphere 148.1
1873 Female, age 85, both hemispheres 119.7
2045 Male, age 76, both hemispheres 113.6
2527 Male, age 74, both hemispheres 107.0
2082 Female, age 91, right hemisphere 105.3
Hippocampus, CA2
nTPM: 125.3
1963 Male, age 80, left hemisphere 172.1
1892 Male, age 76, both hemispheres 141.3
2437 Female, age 94, left hemisphere 125.8
1940 Female, age 85, left hemisphere 113.0
2113 Female, age 91, right hemisphere 102.8
2249 Male, age 74, both hemispheres 96.6
Hippocampus, CA3
nTPM: 129.7
2861 Female, age 67, both hemispheres 178.7
2620 Female, age 94, left hemisphere 145.7
2137 Male, age 80, left hemisphere 136.3
1867 Male, age 76, both hemispheres 120.5
1891 Female, age 85, both hemispheres 104.8
2436 Male, age 74, both hemispheres 92.1
Parahippocampal cortex
nTPM: 121.4
2622 Female, age 67, right hemisphere 143.8
2245 Female, age 91, both hemispheres 131.9
1933 Female, age 85, both hemispheres 124.7
2532 Female, age 72, left hemisphere 123.8
2692 Male, age 74, both hemispheres 117.7
2018 Male, age 76, both hemispheres 117.4
2250 Female, age 67, right hemisphere 117.3
2693 Female, age 94, both hemispheres 113.5
1990 Female, age 91, right hemisphere 112.7
1850 Male, age 80, both hemispheres 111.3
Perirhinal gyrus
nTPM: 123.0
2848 Male, age 76, right hemisphere 133.1
1847 Female, age 91, left hemisphere 127.1
1794 Male, age 80, right hemisphere 121.4
1841 Female, age 85, right hemisphere 119.5
2521 Female, age 94, right hemisphere 114.0
Subiculum
nTPM: 116.0
2619 Male, age 74, both hemispheres 121.8
2438 Female, age 94, left hemisphere 117.0
1977 Female, age 85, both hemispheres 116.5
2729 Female, age 91, right hemisphere 115.2
1901 Male, age 80, both hemispheres 114.4
2042 Male, age 76, both hemispheres 111.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 115.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.3
Samples: 255

Max nTPM: 249.4
Min nTPM: 51.2
Std nTPM: 35.2
Median nTPM: 110.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 249.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 240.2
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 233.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 226.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 226.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 213.8
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 187.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 186.2
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 185.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 180.1
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 179.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 109.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.1
FF:10153-102I9 76 years, female 131.0
FF:10169-103B7 60 years, female 87.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 109.4
Pig sample Sample description nTPM
Subiculum
nTPM: 102.6
Samples: 4

Max nTPM: 120.6
Min nTPM: 90.2
Sample A Female 120.6
Sample B Female 90.2
Sample C Male 108.0
Sample D Male 91.5
Dorsal hippocampus
nTPM: 97.4
Samples: 4

Max nTPM: 111.4
Min nTPM: 82.1
Sample A Female 111.4
Sample B Female 102.8
Sample C Male 93.1
Sample D Male 82.1
Entorhinal cortex
nTPM: 109.4
Samples: 4

Max nTPM: 128.4
Min nTPM: 87.3
Sample A Female 128.0
Sample B Female 87.3
Sample C Male 128.4
Sample D Male 93.8
Ventral hippocampus
nTPM: 102.3
Samples: 4

Max nTPM: 128.9
Min nTPM: 80.4
Sample A Female 89.5
Sample B Female 80.4
Sample C Male 128.9
Sample D Male 110.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 94.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.6
Samples: 4

Max nTPM: 97.8
Min nTPM: 88.9
Sample A Male 97.8
Sample B Male 88.9
Sample C Female 94.3
Sample D Female 97.3
Hippocampal formation
nTPM: 88.6
Samples: 4

Max nTPM: 91.4
Min nTPM: 86.9
Sample A Male 86.9
Sample B Male 87.6
Sample C Female 91.4
Sample D Female 88.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
71488768 Antisense, RP_050825_02_D12, Mouse strain C57BL/6J (56 days, male) 5.2

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