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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
301.9
nTPM
Monaco:
316.7
nTPM
Schmiedel:
478.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
301.9
HPA sample
nTPM
gdT-cell nTPM: 104.2
Samples: 6
Max nTPM: 118.6
Min nTPM: 91.6
P10809_1007
91.6
P10809_1022
95.9
P10809_1041
113.8
P10809_1060
94.6
P10809_1077
118.6
P10809_1098
110.5
MAIT T-cell nTPM: 197.5
Samples: 6
Max nTPM: 219.5
Min nTPM: 155.0
P10809_1006
199.6
P10809_1024
196.2
P10809_1043
155.0
P10809_1062
219.5
P10809_1083
197.1
P10809_1097
217.7
Memory CD4 T-cell nTPM: 206.1
Samples: 6
Max nTPM: 252.6
Min nTPM: 175.8
P10809_1014
252.6
P10809_1026
204.8
P10809_1045
175.8
P10809_1064
200.5
P10809_1086
184.7
P10809_1113
217.9
Memory CD8 T-cell nTPM: 148.2
Samples: 5
Max nTPM: 165.4
Min nTPM: 109.7
P10809_1012
165.4
P10809_1027
149.4
P10809_1046
109.7
P10809_1065
157.3
P10809_1111
159.1
Naive CD4 T-cell nTPM: 301.9
Samples: 6
Max nTPM: 393.3
Min nTPM: 251.4
P10809_1015
325.6
P10809_1030
310.0
P10809_1049
251.4
P10809_1068
393.3
P10809_1085
258.4
P10809_1112
272.6
Naive CD8 T-cell nTPM: 226.5
Samples: 6
Max nTPM: 295.0
Min nTPM: 135.3
P10809_1016
295.0
P10809_1031
256.3
P10809_1050
196.9
P10809_1069
227.3
P10809_1087
135.3
P10809_1110
248.2
T-reg nTPM: 203.1
Samples: 6
Max nTPM: 227.5
Min nTPM: 167.2
P10809_1018
203.0
P10809_1037
227.5
P10809_1056
167.2
P10809_1075
225.3
P10809_1094
189.8
P10809_1106
205.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
316.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 205.6
Samples: 4
Max nTPM: 262.7
Min nTPM: 134.1
RHH5202_R3573
262.7
RHH5230_R3602
180.7
RHH5259_R3631
134.1
RHH5288_R3660
244.9
Effector memory CD8 T-cell nTPM: 168.7
Samples: 4
Max nTPM: 217.0
Min nTPM: 102.2
RHH5203_R3574
217.0
RHH5231_R3603
144.1
RHH5260_R3632
102.2
RHH5289_R3661
211.3
MAIT T-cell nTPM: 191.7
Samples: 4
Max nTPM: 197.0
Min nTPM: 183.6
RHH5233_R3605
183.6
RHH5205_R3576
193.4
RHH5262_R3634
192.8
RHH5297_R3663
197.0
Memory CD4 T-cell TFH nTPM: 227.2
Samples: 4
Max nTPM: 243.3
Min nTPM: 220.1
RHH5300_R3666
243.3
RHH5236_R3608
221.2
RHH5265_R3637
220.1
RHH5208_R3579
224.1
Memory CD4 T-cell Th1 nTPM: 197.1
Samples: 4
Max nTPM: 284.9
Min nTPM: 99.4
RHH5210_R3581
284.9
RHH5302_R3668
262.0
RHH5238_R3610
99.4
RHH5267_R3639
142.0
Memory CD4 T-cell Th1/Th17 nTPM: 209.1
Samples: 4
Max nTPM: 331.8
Min nTPM: 131.7
RHH5303_R3669
331.8
RHH5211_R3582
219.0
RHH5239_R3611
131.7
RHH5268_R3640
153.9
Memory CD4 T-cell Th17 nTPM: 212.1
Samples: 4
Max nTPM: 258.5
Min nTPM: 151.4
RHH5304_R3670
251.1
RHH5212_R3583
187.4
RHH5240_R3612
258.5
RHH5269_R3641
151.4
Memory CD4 T-cell Th2 nTPM: 268.4
Samples: 4
Max nTPM: 326.3
Min nTPM: 227.8
RHH5305_R3671
258.7
RHH5213_R3584
227.8
RHH5241_R3613
326.3
RHH5270_R3642
260.6
Naive CD4 T-cell nTPM: 316.7
Samples: 4
Max nTPM: 362.3
Min nTPM: 283.9
RHH5306_R3672
362.3
RHH5214_R3585
292.3
RHH5242_R3614
328.4
RHH5271_R3643
283.9
Naive CD8 T-cell nTPM: 310.4
Samples: 4
Max nTPM: 379.9
Min nTPM: 158.2
RHH5201_R3572
372.6
RHH5229_R3601
158.2
RHH5258_R3630
330.9
RHH5287_R3659
379.9
Non-Vd2 gdTCR nTPM: 135.2
Samples: 4
Max nTPM: 157.2
Min nTPM: 110.5
RHH5235_R3607
117.3
RHH5264_R3636
157.2
RHH5207_R3578
155.7
RHH5299_R3665
110.5
T-reg nTPM: 218.6
Samples: 4
Max nTPM: 284.7
Min nTPM: 181.0
RHH5301_R3667
227.2
RHH5237_R3609
284.7
RHH5266_R3638
181.0
RHH5209_R3580
181.5
Terminal effector memory CD4 T-cell nTPM: 125.0
Samples: 2
Max nTPM: 159.3
Min nTPM: 90.7
RHH5243_R3615
90.7
RHH5272_R3644
159.3
Terminal effector memory CD8 T-cell nTPM: 112.9
Samples: 4
Max nTPM: 138.4
Min nTPM: 94.2
RHH5232_R3604
124.5
RHH5204_R3575
94.3
RHH5261_R3633
94.2
RHH5296_R3662
138.4
Vd2 gdTCR nTPM: 172.2
Samples: 4
Max nTPM: 221.5
Min nTPM: 131.9
RHH5234_R3606
221.5
RHH5206_R3577
131.9
RHH5263_R3635
151.7
RHH5298_R3664
183.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.