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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
76.5
nTPM
HPA Brain:
17.2
nTPM
GTEx:
76.5
nTPM
FANTOM5:
209.8
Scaled Tags Per Million
Pig:
147.3
nTPM
Mouse:
107.6
nTPM
Allen mouse:
3.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
17.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 14.5
2411
Female, age 72, unknown
15.9
2586
Male, age 75, left hemisphere
15.7
1870
Female, age 42, unknown
15.6
1830
Male, age 51, unknown
15.3
1833
Male, age 53, unknown
15.2
2666
Male, age 74, left hemisphere
15.0
2019
Male, age 18, unknown
14.5
1827
Male, age 72, unknown
13.1
2828
Female, age 72, unknown
12.8
2219
Male, age 76, both hemispheres
12.1
Dorsal raphe nucleus nTPM: 14.8
2016
Female, age 72, unknown
17.4
1828
Male, age 53, unknown
16.9
2750
Male, age 76, both hemispheres
15.4
2298
Female, age 72, unknown
12.5
2047
Male, age 72, unknown
12.1
Inferior colliculus nTPM: 14.9
2097
Female, age 72, unknown
16.1
1890
Male, age 53, unknown
15.5
2849
Male, age 72, unknown
15.1
1848
Female, age 42, unknown
13.0
Median raphe nucleus nTPM: 12.2
2220
Male, age 76, midline
12.2
Periaquaductal grey, anterior nTPM: 17.2
2502
Female, age 75, unknown
19.5
1947
Male, age 18, unknown
19.1
1795
Male, age 51, unknown
13.1
Periaquaductal grey, dorsal nTPM: 14.2
2464
Female, age 72, unknown
15.4
1831
Male, age 72, unknown
14.5
2850
Male, age 76, both hemispheres
14.2
1840
Male, age 53, unknown
12.7
Periaquaductal grey, lateral nTPM: 13.6
2053
Male, age 18, unknown
15.9
2140
Male, age 76, both hemispheres
14.1
2272
Male, age 74, both hemispheres
11.0
Pretectal area nTPM: 16.6
2273
Male, age 74, both hemispheres
20.0
2316
Male, age 76, right hemisphere
19.6
2407
Male, age 75, both hemispheres
19.6
2667
Female, age 75, unknown
17.5
1944
Female, age 72, unknown
17.0
1816
Male, age 51, unknown
16.2
1817
Female, age 42, unknown
15.4
1815
Male, age 53, unknown
15.0
2224
Female, age 72, unknown
14.5
2825
Male, age 18, unknown
14.3
2007
Male, age 72, unknown
13.1
Red nucleus nTPM: 16.2
1821
Female, age 72, unknown
19.4
1954
Female, age 42, unknown
19.2
2503
Female, age 72, unknown
18.5
2823
Male, age 76, right hemisphere
18.4
1904
Male, age 53, unknown
18.2
1865
Male, age 51, unknown
17.6
2588
Male, age 74, left hemisphere
14.8
2769
Male, age 72, unknown
14.4
2227
Male, age 72, unknown
13.8
2785
Male, age 18, unknown
13.8
2725
Female, age 75, unknown
13.7
2584
Male, age 75, left hemisphere
12.5
Substantia nigra nTPM: 15.6
2241
Male, age 72, unknown
23.6
1941
Male, age 53, unknown
17.2
1851
Male, age 51, unknown
17.0
1916
Female, age 42, unknown
16.8
2699
Male, age 18, unknown
15.2
1889
Female, age 72, unknown
13.9
2583
Male, age 75, right hemisphere
13.4
2590
Female, age 75, unknown
13.3
2409
Female, age 72, unknown
12.6
2665
Male, age 74, both hemispheres
12.5
Superior colliculus nTPM: 16.6
1995
Male, age 72, unknown
21.6
1913
Female, age 42, unknown
21.2
2668
Female, age 75, unknown
17.8
2664
Male, age 75, both hemispheres
17.4
1839
Male, age 51, unknown
17.2
2261
Male, age 18, unknown
16.5
1895
Male, age 76, right hemisphere
14.9
2587
Male, age 74, left hemisphere
14.2
2087
Female, age 72, unknown
13.2
1796
Male, age 53, unknown
11.8
Ventral tegmental area nTPM: 14.0
2410
Female, age 72, unknown
15.4
2021
Male, age 53, unknown
14.8
2223
Female, age 72, unknown
13.7
1915
Female, age 42, unknown
13.5
1942
Male, age 51, unknown
13.5
2218
Male, age 76, both hemispheres
13.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
76.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 76.5
Samples: 139
Max nTPM: 137.5
Min nTPM: 43.4
Std nTPM: 17.6
Median nTPM: 72.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
137.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
127.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
119.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
114.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
111.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
107.8
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
107.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
106.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
106.6
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
105.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
102.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
102.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
100.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
99.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
99.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
99.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
98.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
98.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
98.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
98.1
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
98.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
97.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
97.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
97.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
96.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
96.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
96.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
95.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
94.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
94.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
94.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
93.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
91.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
91.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
90.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
89.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
88.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
87.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
86.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
85.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
84.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
84.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
82.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
80.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
80.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
80.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
79.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
79.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
78.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
78.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
78.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
78.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
77.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
77.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
77.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
77.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
77.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
77.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
76.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
76.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
75.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
74.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
74.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
74.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
73.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
72.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
72.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
72.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
72.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
72.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
72.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
71.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
71.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
71.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
71.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
71.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
71.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
71.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
70.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
70.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
69.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
69.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
69.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
69.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
68.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
68.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
67.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
67.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
67.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
67.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
66.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
66.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
66.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
66.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
65.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
65.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
65.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
65.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
65.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
65.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
64.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
64.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
64.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
64.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
63.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
63.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
63.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
63.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
62.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
61.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
61.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
61.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
60.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
60.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
60.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
59.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
59.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
59.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
58.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
58.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
57.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
57.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
57.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
57.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
57.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
56.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
56.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
55.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
55.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
54.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
54.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
54.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
53.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
53.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
53.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
52.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
49.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
44.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
43.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
107.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 107.7
Samples: 4
Max nTPM: 112.9
Min nTPM: 103.8
Sample A
Male
103.8
Sample B
Male
107.0
Sample C
Female
106.9
Sample D
Female
112.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.