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  • SUMMARY

  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:320.6 nTPM
HPA Brain:348.8 nTPM
GTEx:320.6 nTPM
Pig:273.7 nTPM
Mouse:310.7 nTPM
Allen mouse:15.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

348.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 259.9
2226 Male, age 75, left hemisphere 296.2
1961 Female, age 42, unknown 223.7
Dorsomedial nucleus
nTPM: 267.1
1989 Male, age 62, unknown 354.7
2041 Female, age 72, unknown 253.8
2017 Female, age 42, unknown 192.9
Lateral hypothalamic area
nTPM: 248.1
1791 Male, age 80, right hemisphere 295.0
2228 Male, age 66, unknown 268.4
2271 Male, age 75, both hemispheres 226.7
2412 Male, age 62, unknown 202.6
Mammillary body
nTPM: 348.8
1923 Female, age 72, unknown 509.6
2413 Male, age 66, unknown 380.8
1948 Female, age 72, unknown 328.2
1834 Female, age 42, unknown 263.1
1945 Male, age 80, right hemisphere 262.3
Paraventricular nucleus
nTPM: 197.2
2700 Male, age 62, unknown 197.2
Preoptic area
nTPM: 212.0
1907 Male, age 80, right hemisphere 266.2
1861 Female, age 42, unknown 193.9
2414 Female, age 72, unknown 175.8
Supraoptic nucleus
nTPM: 187.7
2835 Female, age 72, unknown 215.3
1894 Female, age 72, unknown 188.0
2043 Male, age 62, unknown 159.6
Ventromedial nucleus
nTPM: 249.5
1982 Female, age 72, unknown 283.6
1822 Female, age 42, unknown 215.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

320.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 320.6
Samples: 257

Max nTPM: 594.3
Min nTPM: 167.8
Std nTPM: 72.0
Median nTPM: 310.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 594.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 590.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 573.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 568.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 550.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 524.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 495.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 492.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 472.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 468.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 467.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 462.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 459.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 454.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 446.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 437.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 435.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 427.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 427.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 419.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 419.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 417.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 414.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 412.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 410.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 406.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 405.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 403.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 400.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 394.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 394.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 393.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 392.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 390.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 389.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 389.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 387.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 387.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 385.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 385.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 384.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 383.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 382.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 381.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 380.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 378.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 374.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 373.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 372.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 370.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 369.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 365.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 365.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 363.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 363.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 362.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 362.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 361.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 360.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 360.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 360.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 360.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 360.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 359.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 359.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 359.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 358.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 357.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 356.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 356.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 356.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 354.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 352.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 352.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 351.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 351.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 351.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 349.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 347.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 346.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 345.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 344.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 344.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 343.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 343.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 342.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 341.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 341.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 340.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 337.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 337.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 337.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 337.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 335.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 334.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 334.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 333.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 330.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 329.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 328.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 328.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 327.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 326.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 324.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 324.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 323.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 322.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 322.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 321.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 320.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 320.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 319.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 319.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 316.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 315.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 315.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 315.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 315.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 314.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 314.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 313.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 313.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 312.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 312.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 312.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 312.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 311.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 311.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 310.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 310.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 309.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 307.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 307.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 307.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 307.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 307.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 305.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 305.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 304.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 304.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 304.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 304.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 303.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 301.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 301.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 301.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 301.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 300.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 300.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 299.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 298.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 298.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 297.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 297.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 297.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 296.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 295.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 295.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 295.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 294.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 294.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 292.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 292.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 292.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 290.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 290.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 290.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 289.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 289.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 288.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 287.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 286.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 285.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 284.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 284.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 284.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 284.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 282.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 282.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 282.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 280.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 279.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 279.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 279.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 278.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 277.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 276.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 275.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 274.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 274.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 273.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 273.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 271.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 270.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 270.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 269.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 268.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 268.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 266.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 266.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 266.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 266.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 265.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 264.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 263.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 262.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 261.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 261.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 260.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 259.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 259.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 258.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 257.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 257.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 256.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 256.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 254.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 252.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 250.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 250.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 250.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 250.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 249.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 246.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 245.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 244.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 243.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 243.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 240.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 239.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 238.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 238.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 237.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 237.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 236.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 235.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 230.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 229.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 229.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 228.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 227.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 227.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 226.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 226.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 218.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 217.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 217.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 216.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 215.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 215.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 215.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 209.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 195.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 195.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 188.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 184.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 167.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

273.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 273.7
Samples: 4

Max nTPM: 365.5
Min nTPM: 223.1
Sample A Female 365.5
Sample B Female 272.3
Sample C Male 234.0
Sample D Male 223.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

310.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 310.6
Samples: 4

Max nTPM: 366.0
Min nTPM: 276.6
Sample A Male 321.2
Sample B Male 366.0
Sample C Female 276.6
Sample D Female 278.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 15.5
69524404 Antisense, RP_050419_04_C07, Mouse strain C57BL/6J (56 days, male) 15.5

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