PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:542.4 nTPM
FANTOM5:6.6 Scaled Tags Per Million
Pig:108.0 nTPM
Mouse:556.5 nTPM
Allen mouse:1.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 542.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 445.4
2090 Male, age 80, both hemispheres 467.3
2188 Female, age 91, both hemispheres 466.9
2301 Female, age 85, both hemispheres 448.7
1984 Male, age 76, both hemispheres 398.6
Area postrema
nTPM: 503.1
2306 Male, age 80, both hemispheres 626.8
2799 Male, age 61, both hemispheres 571.7
2054 Male, age 76, both hemispheres 310.8
Dorsal cochlear nucleus
nTPM: 434.5
2187 Female, age 91, both hemispheres 476.1
2378 Male, age 80, both hemispheres 469.6
2802 Male, age 74, right hemisphere 439.9
2370 Male, age 61, both hemispheres 435.0
2058 Male, age 76, both hemispheres 352.0
Dorsal medullary reticular nucleus
nTPM: 385.0
2373 Male, age 61, both hemispheres 418.6
2040 Female, age 85, both hemispheres 383.3
2088 Male, age 76, both hemispheres 353.2
Dorsal motor vagal complex
nTPM: 461.5
2797 Male, age 61, both hemispheres 608.2
2643 Male, age 74, both hemispheres 535.0
2807 Female, age 85, both hemispheres 492.8
2185 Male, age 76, both hemispheres 434.7
2133 Female, age 91, both hemispheres 420.2
2813 Female, age 72, unknown 401.8
2844 Male, age 55, unknown 401.3
2000 Male, age 74, unknown 398.3
Dorsal tegmental nucleus
nTPM: 445.2
2358 Male, age 61, both hemispheres 484.6
2326 Male, age 74, both hemispheres 479.0
2083 Male, age 80, both hemispheres 451.4
1936 Male, age 76, left hemisphere 366.0
Dorsolateral tegmental area
nTPM: 426.7
2337 Male, age 61, both hemispheres 542.8
2654 Male, age 80, both hemispheres 483.7
2360 Male, age 74, both hemispheres 406.1
2751 Female, age 85, both hemispheres 370.6
2141 Male, age 76, both hemispheres 330.6
Gigantocellular reticular nuclei, medullary
nTPM: 412.8
2314 Male, age 61, both hemispheres 512.3
2310 Male, age 80, both hemispheres 437.4
2387 Female, age 91, both hemispheres 411.5
2022 Male, age 76, right hemisphere 397.5
2462 Male, age 74, both hemispheres 376.1
1876 Female, age 85, both hemispheres 341.8
Gigantocellular reticular nuclei, pars
nTPM: 367.8
2084 Female, age 85, both hemispheres 382.9
2336 Male, age 61, both hemispheres 374.2
2168 Male, age 76, both hemispheres 367.4
2330 Male, age 80, both hemispheres 366.5
2706 Male, age 80, both hemispheres 347.8
Inferior olive
nTPM: 471.6
2628 Female, age 91, both hemispheres 508.1
2178 Male, age 61, both hemispheres 497.2
2563 Male, age 74, both hemispheres 457.7
2085 Female, age 85, both hemispheres 448.9
2379 Male, age 80, both hemispheres 445.9
Kolliker-Fuse nucleus
nTPM: 453.3
2315 Male, age 76, right hemisphere 523.2
2793 Female, age 91, left hemisphere 425.2
2163 Male, age 80, both hemispheres 411.4
Lateral lemniscal nuclei
nTPM: 383.2
2169 Male, age 76, both hemispheres 410.4
2746 Female, age 85, left hemisphere 408.4
2320 Female, age 91, left hemisphere 403.4
2036 Male, age 80, both hemispheres 350.3
2453 Male, age 74, right hemisphere 343.4
Lateral medullary reticular nucleus
nTPM: 455.7
2190 Female, age 85, both hemispheres 526.3
2852 Male, age 80, both hemispheres 519.7
2804 Female, age 91, both hemispheres 463.6
2374 Male, age 61, both hemispheres 434.6
2044 Male, age 76, both hemispheres 398.8
2305 Male, age 74, both hemispheres 391.2
Lateral parabrachial nucleus
nTPM: 450.4
2013 Male, age 80, both hemispheres 505.1
2792 Male, age 76, both hemispheres 480.9
2139 Female, age 85, right hemisphere 446.7
2790 Male, age 61, both hemispheres 368.8
Lateral vestibular nucleus
nTPM: 456.1
2311 Male, age 80, both hemispheres 535.1
2184 Male, age 76, both hemispheres 377.1
Locus coeruleus
nTPM: 363.0
2123 Female, age 91, both hemispheres 423.6
2162 Male, age 80, both hemispheres 407.0
2720 Male, age 74, both hemispheres 403.8
2317 Female, age 72, unknown 391.5
1980 Male, age 76, both hemispheres 355.0
2014 Male, age 55, unknown 331.5
2788 Male, age 74, unknown 229.0
Medial olivary nucleus
nTPM: 501.0
1962 Male, age 76, both hemispheres 507.2
1943 Male, age 61, both hemispheres 502.1
2851 Male, age 80, both hemispheres 500.7
2138 Female, age 91, both hemispheres 494.0
Medial parabrachial nucleus
nTPM: 416.2
2170 Female, age 91, both hemispheres 521.4
2156 Male, age 61, both hemispheres 408.5
2854 Male, age 80, both hemispheres 403.7
2463 Female, age 85, right hemisphere 390.1
2786 Male, age 76, both hemispheres 357.2
Medial periolivary nuclei
nTPM: 379.7
2063 Male, age 76, both hemispheres 434.5
2458 Female, age 91, both hemispheres 390.2
2081 Male, age 80, both hemispheres 387.5
2171 Female, age 85, both hemispheres 371.2
2791 Male, age 74, right hemisphere 315.2
Medial vestibular nucleus
nTPM: 384.7
2624 Male, age 61, both hemispheres 445.4
2743 Female, age 85, both hemispheres 393.2
2803 Female, age 91, both hemispheres 384.6
2801 Male, age 74, both hemispheres 372.3
2093 Male, age 80, both hemispheres 360.2
2134 Male, age 76, both hemispheres 352.6
Motor facial nucleus
nTPM: 370.4
2795 Female, age 91, both hemispheres 428.8
2062 Male, age 76, both hemispheres 412.1
2365 Male, age 74, right hemisphere 369.2
2697 Female, age 85, both hemispheres 363.0
2126 Male, age 61, both hemispheres 344.9
2327 Male, age 80, both hemispheres 304.3
Motor hypoglossal nucleus
nTPM: 414.8
2182 Male, age 80, both hemispheres 599.3
2132 Female, age 85, both hemispheres 435.1
2125 Female, age 91, both hemispheres 418.0
2277 Male, age 76, both hemispheres 334.9
2461 Male, age 61, both hemispheres 286.4
Motor trigeminal nucleus
nTPM: 393.1
2335 Male, age 61, both hemispheres 447.1
2321 Female, age 91, both hemispheres 414.6
2560 Male, age 74, both hemispheres 407.3
2309 Male, age 76, both hemispheres 372.1
2079 Male, age 80, both hemispheres 324.3
Nuclei of the trapezoid body
nTPM: 388.5
1983 Male, age 76, both hemispheres 487.7
2735 Female, age 85, both hemispheres 375.0
2368 Female, age 91, both hemispheres 367.8
2166 Male, age 80, both hemispheres 364.1
2159 Male, age 61, both hemispheres 348.0
Nucleus ambiguus
nTPM: 399.4
2071 Male, age 76, both hemispheres 472.0
2096 Female, age 85, both hemispheres 326.9
Nucleus cuneatus
nTPM: 428.0
2808 Female, age 85, both hemispheres 493.6
2805 Female, age 91, both hemispheres 469.1
2562 Male, age 61, both hemispheres 461.2
2380 Male, age 80, both hemispheres 458.6
2564 Male, age 74, both hemispheres 457.2
2381 Male, age 80, both hemispheres 433.2
2376 Male, age 61, both hemispheres 414.7
2100 Male, age 76, both hemispheres 332.7
2131 Male, age 76, both hemispheres 331.7
Nucleus gracilis
nTPM: 542.4
2299 Female, age 85, both hemispheres 612.7
2382 Male, age 80, both hemispheres 547.1
2627 Male, age 74, both hemispheres 467.4
Nucleus raphe magnus
nTPM: 375.4
2051 Male, age 76, both hemispheres 399.5
2172 Female, age 85, both hemispheres 387.3
2459 Female, age 91, both hemispheres 386.2
2328 Male, age 80, both hemispheres 368.1
2160 Male, age 61, both hemispheres 357.0
2455 Male, age 74, both hemispheres 354.5
Nucleus raphe obscurus
nTPM: 440.2
2142 Male, age 76, midline 471.5
2845 Female, age 85, midline 442.5
2800 Male, age 61, midline 406.7
Nucleus raphe pallidus
nTPM: 514.1
1924 Male, age 61, midline 580.7
2183 Male, age 80, midline 519.9
2145 Male, age 76, midline 441.8
Nucleus tractus solitarii
nTPM: 379.5
2191 Female, age 85, both hemispheres 523.1
2307 Male, age 80, both hemispheres 392.6
2656 Male, age 76, both hemispheres 337.6
2144 Female, age 91, right hemisphere 264.9
Paramedian reticular nucleus
nTPM: 360.5
2057 Male, age 80, both hemispheres 389.9
2313 Male, age 61, both hemispheres 385.1
2050 Female, age 85, both hemispheres 340.4
2052 Male, age 76, both hemispheres 326.8
Parvicellular reticular nuclei
nTPM: 375.0
2119 Male, age 80, both hemispheres 388.2
2095 Male, age 76, both hemispheres 374.0
2558 Male, age 74, both hemispheres 362.7
Parvicellular reticular nuclei, medullary
nTPM: 418.4
2189 Female, age 91, both hemispheres 435.6
2091 Female, age 85, both hemispheres 411.3
2181 Male, age 80, left hemisphere 408.3
Pedunculopontine tegmental nucleus
nTPM: 386.7
2334 Male, age 80, both hemispheres 451.6
2338 Male, age 61, both hemispheres 408.2
1921 Female, age 85, both hemispheres 300.3
Peritrigeminal nucleus
nTPM: 483.9
2067 Female, age 85, both hemispheres 601.8
2136 Male, age 76, both hemispheres 454.4
2179 Male, age 61, both hemispheres 395.5
Pontine nuclei
nTPM: 412.4
2787 Female, age 85, both hemispheres 511.3
2319 Female, age 91, both hemispheres 457.8
1968 Male, age 76, left hemisphere 432.9
1863 Male, age 55, unknown 418.5
2109 Female, age 72, unknown 391.5
2115 Male, age 80, left hemisphere 386.3
2454 Male, age 74, left hemisphere 365.9
2727 Male, age 61, right hemisphere 335.4
Pontine raphe nucleus
nTPM: 364.2
2122 Female, age 85, midline 382.1
2853 Male, age 76, midline 346.4
Posteroventral cochlear nucleus
nTPM: 430.0
2371 Male, age 61, both hemispheres 473.8
2135 Female, age 91, both hemispheres 451.9
2341 Male, age 80, both hemispheres 440.5
2070 Male, age 76, both hemispheres 418.7
2752 Female, age 85, both hemispheres 365.1
Prepositus hypoglossal nucleus
nTPM: 432.9
2086 Male, age 80, both hemispheres 468.8
2855 Female, age 85, right hemisphere 397.1
Principal sensory trigeminal nucleus
nTPM: 369.7
2324 Male, age 76, both hemispheres 403.6
2158 Male, age 61, both hemispheres 397.6
2367 Female, age 91, left hemisphere 388.4
2008 Male, age 80, left hemisphere 289.0
Reticular pontine nucleus, caudal
nTPM: 393.6
2092 Male, age 76, both hemispheres 437.0
2559 Male, age 74, both hemispheres 418.9
2457 Female, age 91, both hemispheres 381.4
2332 Male, age 80, right hemisphere 337.2
Reticular pontine nucleus, oral
nTPM: 379.6
2366 Female, age 91, both hemispheres 441.1
2167 Male, age 76, both hemispheres 406.1
1939 Male, age 80, both hemispheres 377.6
2361 Male, age 74, both hemispheres 337.1
2012 Female, age 85, both hemispheres 336.0
Reticulotegmental nucleus
nTPM: 397.8
2452 Male, age 74, both hemispheres 465.2
2322 Female, age 91, both hemispheres 395.3
2333 Male, age 80, both hemispheres 376.8
2325 Male, age 76, both hemispheres 353.8
Spinal trigeminal nucleus, caudal
nTPM: 430.5
2308 Male, age 80, both hemispheres 463.8
2312 Male, age 61, both hemispheres 463.8
2642 Male, age 74, both hemispheres 445.0
2390 Female, age 91, both hemispheres 402.7
2447 Male, age 76, both hemispheres 377.4
Spinal trigeminal nucleus, interpolar
nTPM: 406.9
2033 Male, age 80, both hemispheres 435.9
2066 Male, age 76, right hemisphere 415.0
2389 Female, age 91, both hemispheres 401.5
2386 Female, age 85, both hemispheres 392.4
2625 Male, age 61, both hemispheres 389.9
Spinal trigeminal nucleus, oral
nTPM: 388.5
2164 Male, age 80, both hemispheres 427.3
1978 Male, age 76, both hemispheres 390.6
2737 Female, age 85, both hemispheres 347.6
Spinal vestibular nucleus
nTPM: 439.5
2384 Male, age 74, both hemispheres 527.6
2780 Male, age 80, both hemispheres 464.6
2748 Male, age 76, both hemispheres 417.7
2796 Male, age 61, both hemispheres 417.3
2186 Female, age 91, both hemispheres 410.0
2806 Female, age 85, both hemispheres 399.5
Subcoeruleus area
nTPM: 394.4
2451 Male, age 74, both hemispheres 520.2
2323 Female, age 91, left hemisphere 391.2
2369 Female, age 85, left hemisphere 363.9
1958 Male, age 80, both hemispheres 353.8
2089 Male, age 76, left hemisphere 343.0
Superior olive
nTPM: 372.5
2020 Male, age 76, both hemispheres 406.0
2561 Female, age 91, both hemispheres 398.5
2364 Male, age 74, right hemisphere 361.4
2329 Male, age 80, right hemisphere 358.9
1875 Female, age 85, both hemispheres 337.9
Superior vestibular nucleus
nTPM: 422.9
2015 Male, age 80, both hemispheres 453.6
2383 Male, age 74, both hemispheres 410.2
2061 Male, age 76, both hemispheres 404.7
Ventral medullary reticular nucleus
nTPM: 417.1
2372 Male, age 61, both hemispheres 455.0
2060 Male, age 76, both hemispheres 379.3
Ventral periolivary nuclei
nTPM: 371.9
2023 Male, age 76, both hemispheres 412.7
2165 Male, age 80, both hemispheres 373.6
2794 Female, age 91, left hemisphere 364.4
2130 Female, age 85, both hemispheres 336.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 484.8
2302 Female, age 91, both hemispheres 519.3
2118 Male, age 80, both hemispheres 518.4
2741 Female, age 85, both hemispheres 484.2
1986 Male, age 76, both hemispheres 452.2
2180 Male, age 61, both hemispheres 450.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 387.5
2161 Male, age 80, both hemispheres 445.5
2456 Female, age 91, both hemispheres 399.6
1959 Male, age 76, both hemispheres 387.9
2359 Male, age 61, both hemispheres 385.8
2840 Female, age 85, both hemispheres 366.8
2449 Male, age 74, both hemispheres 339.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 6.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 4.8
FF:10182-103D2 60 years, female 5.6
FF:10165-103B3 76 years, female 4.1
Medulla oblongata
Scaled Tags Per Million: 6.0
FF:10174-103C3 60 years, female 7.9
FF:10038-101F2 18-64 years, mixed 6.1
FF:10155-103A2 76 years, female 4.0
Pons
Scaled Tags Per Million: 6.6
FF:10033-101E6 18-54 years, mixed 6.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 108.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 108.0
Samples: 4

Max nTPM: 125.5
Min nTPM: 88.0
Sample A Female 88.0
Sample B Female 94.6
Sample C Male 123.8
Sample D Male 125.5
Pons
nTPM: 107.5
Samples: 4

Max nTPM: 129.4
Min nTPM: 77.4
Sample A Female 103.4
Sample B Female 77.4
Sample C Male 119.8
Sample D Male 129.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 556.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 556.5
Samples: 4

Max nTPM: 598.6
Min nTPM: 514.8
Sample A Male 598.6
Sample B Male 524.4
Sample C Female 588.0
Sample D Female 514.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.2
678716 Antisense, RP_040914_02_G08, Mouse strain C57BL/6J (56 days, male) 1.2
Pons
Expression energy: 1.0
678716 Antisense, RP_040914_02_G08, Mouse strain C57BL/6J (56 days, male) 1.0

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