RPL18A
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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPL18A
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:441.7 nTPM
GTEx:803.0 nTPM
FANTOM5:10.0 Scaled Tags Per Million
Pig:93.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

441.7
Sample id Sample description nTPM
Putamen
nTPM: 441.7
2466 Female, age 79, unknown 510.0
2482 Female, age 94, left hemisphere 460.5
1937 Female, age 91, right hemisphere 442.1
2647 Male, age 75, left hemisphere 438.3
1838 Male, age 80, right hemisphere 434.0
2489 Female, age 72, unknown 428.6
1829 Male, age 74, unknown 378.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

803.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 803.0
Samples: 254

Max nTPM: 1799.4
Min nTPM: 435.9
Std nTPM: 226.3
Median nTPM: 756.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1799.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1693.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1662.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1529.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1517.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1468.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1451.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1281.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1276.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1268.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1261.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1251.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1237.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1208.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1207.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1202.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1172.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1167.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1155.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1141.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1131.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1123.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1117.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1110.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1102.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1101.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1093.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1093.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1091.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1080.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1069.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1059.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1045.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1037.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1033.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1033.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1028.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1012.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1006.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1002.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 998.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 996.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 971.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 970.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 970.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 967.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 966.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 947.3
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 946.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 945.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 938.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 936.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 932.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 929.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 926.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 922.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 918.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 917.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 913.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 909.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 907.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 899.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 899.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 898.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 893.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 892.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 890.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 888.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 886.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 885.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 871.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 867.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 863.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 863.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 863.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 861.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 857.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 855.0
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 853.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 850.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 849.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 846.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 843.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 842.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 839.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 837.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 836.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 835.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 833.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 831.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 829.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 829.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 827.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 826.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 822.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 816.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 809.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 808.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 807.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 807.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 802.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 800.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 799.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 799.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 796.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 795.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 794.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 794.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 792.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 791.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 789.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 787.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 784.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 780.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 780.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 778.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 777.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 774.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 774.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 767.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 766.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 765.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 765.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 764.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 763.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 760.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 757.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 756.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 755.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 755.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 753.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 753.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 750.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 749.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 747.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 747.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 745.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 743.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 740.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 738.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 738.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 738.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 737.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 737.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 735.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 735.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 732.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 732.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 732.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 730.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 730.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 729.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 726.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 725.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 722.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 720.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 720.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 718.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 718.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 718.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 717.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 716.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 716.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 714.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 712.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 710.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 709.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 707.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 703.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 703.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 702.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 701.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 698.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 697.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 695.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 691.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 690.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 688.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 686.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 685.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 685.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 684.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 683.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 679.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 678.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 675.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 674.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 663.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 662.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 659.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 655.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 651.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 651.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 648.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 648.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 647.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 647.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 642.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 641.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 639.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 632.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 632.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 631.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 624.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 623.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 622.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 620.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 618.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 616.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 615.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 614.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 607.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 601.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 601.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 600.9
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 600.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 597.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 593.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 592.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 589.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 586.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 576.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 575.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 573.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 572.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 569.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 569.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 563.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 560.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 560.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 555.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 550.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 542.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 541.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 537.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 525.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 522.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 511.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 510.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 508.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 505.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 505.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 499.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 491.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 490.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 472.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 470.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 468.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 468.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 460.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 457.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 457.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 453.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 435.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

10.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 10.0
FF:10176-103C5 60 years, female 10.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.1
Pig sample Sample description nTPM
Putamen
nTPM: 93.1
Samples: 3

Max nTPM: 110.3
Min nTPM: 72.6
Sample B Female 72.6
Sample C Male 110.3
Sample D Male 96.4

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