HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:62.7 nTPM
HPA Brain:109.4 nTPM
GTEx:62.7 nTPM
FANTOM5:63.9 Scaled Tags Per Million
Pig:134.4 nTPM
Mouse:172.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028423Antibody CAB004422
Glial cells Not detectedLow
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 109.4
Sample id Sample description nTPM
Hippocampus
nTPM: 88.1
2621 Female, age 67, right hemisphere 124.1
1855 Male, age 76, left hemisphere 87.8
1898 Male, age 80, left hemisphere 86.7
2148 Female, age 91, left hemisphere 79.1
2529 Female, age 94, left hemisphere 76.6
1911 Female, age 85, right hemisphere 74.4
Dentate gyrus
nTPM: 87.8
2530 Female, age 94, left hemisphere 106.8
2531 Female, age 67, both hemispheres 99.3
2246 Female, age 85, both hemispheres 89.3
1927 Female, age 91, both hemispheres 86.0
2010 Male, age 76, both hemispheres 74.7
2528 Male, age 74, both hemispheres 70.5
Entorhinal gyrus
nTPM: 98.2
2613 Female, age 94, left hemisphere 141.9
1787 Male, age 76, left hemisphere 100.7
1938 Female, age 85, left hemisphere 95.0
2686 Male, age 75, right hemisphere 92.7
2764 Male, age 80, right hemisphere 90.5
2117 Female, age 91, right hemisphere 68.5
Hippocampus, CA1
nTPM: 84.3
2749 Male, age 80, left hemisphere 114.1
2527 Male, age 74, both hemispheres 89.8
1873 Female, age 85, both hemispheres 82.5
2045 Male, age 76, both hemispheres 74.7
2082 Female, age 91, right hemisphere 60.6
Hippocampus, CA2
nTPM: 82.3
1892 Male, age 76, both hemispheres 106.9
2437 Female, age 94, left hemisphere 106.5
1940 Female, age 85, left hemisphere 81.1
1963 Male, age 80, left hemisphere 67.2
2249 Male, age 74, both hemispheres 66.1
2113 Female, age 91, right hemisphere 65.7
Hippocampus, CA3
nTPM: 87.5
2137 Male, age 80, left hemisphere 102.8
2620 Female, age 94, left hemisphere 98.8
2861 Female, age 67, both hemispheres 92.5
1867 Male, age 76, both hemispheres 84.4
1891 Female, age 85, both hemispheres 76.7
2436 Male, age 74, both hemispheres 70.0
Parahippocampal cortex
nTPM: 109.4
2245 Female, age 91, both hemispheres 182.6
2532 Female, age 72, left hemisphere 137.1
2622 Female, age 67, right hemisphere 119.9
2250 Female, age 67, right hemisphere 116.0
2693 Female, age 94, both hemispheres 110.2
1850 Male, age 80, both hemispheres 96.2
2692 Male, age 74, both hemispheres 93.3
1933 Female, age 85, both hemispheres 83.2
1990 Female, age 91, right hemisphere 79.4
2018 Male, age 76, both hemispheres 75.9
Perirhinal gyrus
nTPM: 100.4
2521 Female, age 94, right hemisphere 111.4
1794 Male, age 80, right hemisphere 103.8
2848 Male, age 76, right hemisphere 96.5
1841 Female, age 85, right hemisphere 96.3
1847 Female, age 91, left hemisphere 93.8
Subiculum
nTPM: 97.6
2438 Female, age 94, left hemisphere 147.8
2619 Male, age 74, both hemispheres 107.1
1901 Male, age 80, both hemispheres 96.5
1977 Female, age 85, both hemispheres 85.9
2042 Male, age 76, both hemispheres 85.9
2729 Female, age 91, right hemisphere 62.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 62.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.7
Samples: 255

Max nTPM: 127.1
Min nTPM: 27.2
Std nTPM: 19.5
Median nTPM: 60.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 127.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 124.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 116.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 114.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 112.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 110.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 106.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 105.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 103.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 102.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 101.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 63.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.9
FF:10153-102I9 76 years, female 72.8
FF:10169-103B7 60 years, female 55.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 134.4
Pig sample Sample description nTPM
Subiculum
nTPM: 108.7
Samples: 4

Max nTPM: 142.6
Min nTPM: 95.2
Sample A Female 142.6
Sample B Female 95.2
Sample C Male 98.9
Sample D Male 98.2
Dorsal hippocampus
nTPM: 134.4
Samples: 4

Max nTPM: 169.0
Min nTPM: 109.3
Sample A Female 169.0
Sample B Female 135.2
Sample C Male 123.9
Sample D Male 109.3
Entorhinal cortex
nTPM: 127.5
Samples: 4

Max nTPM: 146.0
Min nTPM: 116.5
Sample A Female 146.0
Sample B Female 117.5
Sample C Male 130.1
Sample D Male 116.5
Ventral hippocampus
nTPM: 113.0
Samples: 4

Max nTPM: 153.4
Min nTPM: 71.6
Sample A Female 99.4
Sample B Female 71.6
Sample C Male 127.4
Sample D Male 153.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 172.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 172.3
Samples: 4

Max nTPM: 177.6
Min nTPM: 163.8
Sample A Male 174.4
Sample B Male 173.3
Sample C Female 163.8
Sample D Female 177.6
Hippocampal formation
nTPM: 164.6
Samples: 4

Max nTPM: 170.4
Min nTPM: 161.7
Sample A Male 164.0
Sample B Male 162.2
Sample C Female 170.4
Sample D Female 161.7

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