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  • RAPGEF1
IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:0.2 nTPM
Monaco:33.5 nTPM
Schmiedel:224.3 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

0.2
HPA sample nTPM
NK-cell
nTPM: 0.3
Samples: 6

Max nTPM: 0.6
Min nTPM: 0.0
P10809_1013 0.5
P10809_1033 0.0
P10809_1052 0.4
P10809_1071 0.6
P10809_1093 0.0
P10809_1103 0.0

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

33.5
Monaco sample nTPM
NK-cell
nTPM: 33.5
Samples: 4

Max nTPM: 45.5
Min nTPM: 27.4
RHH5316_R3683 30.8
RHH5224_R3596 27.4
RHH5253_R3625 45.5
RHH5282_R3654 30.2

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

224.3
Schmiedel sample id TPM
NK-cell
TPM: 224.3
Samples: 90

Max TPM: 351.2
Min TPM: 113.5
NK_1 351.2
NK_2 337.3
NK_3 333.0
NK_4 328.8
NK_5 326.2
NK_6 325.4
NK_7 318.7
NK_8 318.6
NK_9 314.3
NK_10 311.8
NK_11 308.8
NK_12 307.9
NK_13 306.5
NK_14 297.6
NK_15 292.8
NK_16 288.4
NK_17 280.6
NK_18 279.5
NK_19 278.5
NK_20 276.7
NK_21 272.3
NK_22 270.5
NK_23 266.8
NK_24 266.6
NK_25 264.9
NK_26 262.9
NK_27 256.9
NK_28 255.5
NK_29 247.7
NK_30 242.3
NK_31 242.0
NK_32 241.6
NK_33 241.5
NK_34 240.9
NK_35 240.8
NK_36 233.8
NK_37 232.8
NK_38 227.9
NK_39 224.7
NK_40 224.5
NK_41 223.5
NK_42 221.7
NK_43 221.1
NK_44 220.3
NK_45 217.3
NK_46 216.7
NK_47 214.8
NK_48 212.7
NK_49 209.9
NK_50 209.3
NK_51 209.0
NK_52 208.9
NK_53 206.4
NK_54 199.3
NK_55 199.3
NK_56 197.5
NK_57 196.4
NK_58 195.4
NK_59 194.0
NK_60 193.3
NK_61 192.3
NK_62 191.3
NK_63 188.4
NK_64 187.5
NK_65 186.1
NK_66 185.5
NK_67 184.3
NK_68 182.7
NK_69 178.4
NK_70 177.5
NK_71 172.9
NK_72 170.9
NK_73 170.7
NK_74 168.6
NK_75 168.1
NK_76 167.5
NK_77 164.7
NK_78 164.3
NK_79 160.0
NK_80 158.5
NK_81 156.2
NK_82 154.8
NK_83 150.4
NK_84 138.4
NK_85 136.8
NK_86 131.8
NK_87 129.4
NK_88 128.8
NK_89 119.7
NK_90 113.5
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