A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1.0
nTPM
Monaco:
39.0
nTPM
Schmiedel:
212.7
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1.0
HPA sample
nTPM
Classical monocyte nTPM: 0.6
Samples: 6
Max nTPM: 0.8
Min nTPM: 0.4
P10809_1003
0.7
P10809_1020
0.4
P10809_1039
0.5
P10809_1058
0.8
P10809_1080
0.8
P10809_1107
0.4
Intermediate monocyte nTPM: 0.7
Samples: 6
Max nTPM: 2.0
Min nTPM: 0.0
P10809_1004
0.8
P10809_1023
0.0
P10809_1042
2.0
P10809_1061
0.0
P10809_1081
0.8
P10809_1108
0.8
Non-classical monocyte nTPM: 1.1
Samples: 5
Max nTPM: 2.1
Min nTPM: 0.0
P10809_1005
1.1
P10809_1053
1.2
P10809_1072
0.0
P10809_1082
0.9
P10809_1109
2.1
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
39.0
Monaco sample
nTPM
Classical monocyte nTPM: 13.1
Samples: 4
Max nTPM: 13.5
Min nTPM: 12.7
RHH5313_R3680
12.7
RHH5221_R3593
13.2
RHH5250_R3622
13.0
RHH5279_R3651
13.5
Intermediate monocyte nTPM: 28.6
Samples: 4
Max nTPM: 45.9
Min nTPM: 19.2
RHH5314_R3681
20.4
RHH5222_R3594
19.2
RHH5251_R3623
45.9
RHH5280_R3652
29.0
Non-classical monocyte nTPM: 39.0
Samples: 4
Max nTPM: 43.6
Min nTPM: 30.8
RHH5315_R3682
30.8
RHH5223_R3595
40.0
RHH5252_R3624
43.6
RHH5281_R3653
41.6
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
212.7
Schmiedel sample id
TPM
Classical monocyte TPM: 94.3
Samples: 91
Max TPM: 132.1
Min TPM: 55.4
MONOCYTES_1
132.1
MONOCYTES_2
131.3
MONOCYTES_3
126.5
MONOCYTES_4
118.5
MONOCYTES_5
117.0
MONOCYTES_6
116.3
MONOCYTES_7
116.3
MONOCYTES_8
116.0
MONOCYTES_9
115.7
MONOCYTES_10
115.2
MONOCYTES_11
114.2
MONOCYTES_12
113.2
MONOCYTES_13
112.5
MONOCYTES_14
111.5
MONOCYTES_15
111.2
MONOCYTES_16
110.0
MONOCYTES_17
109.2
MONOCYTES_18
109.2
MONOCYTES_19
108.4
MONOCYTES_20
108.0
MONOCYTES_21
107.5
MONOCYTES_22
107.5
MONOCYTES_23
107.4
MONOCYTES_24
106.4
MONOCYTES_25
106.0
MONOCYTES_26
105.6
MONOCYTES_27
105.0
MONOCYTES_28
102.9
MONOCYTES_29
102.0
MONOCYTES_30
101.7
MONOCYTES_31
100.7
MONOCYTES_32
100.6
MONOCYTES_33
100.4
MONOCYTES_34
100.0
MONOCYTES_35
99.6
MONOCYTES_36
99.6
MONOCYTES_37
99.5
MONOCYTES_38
98.5
MONOCYTES_39
98.5
MONOCYTES_40
98.4
MONOCYTES_41
97.2
MONOCYTES_42
96.1
MONOCYTES_43
95.9
MONOCYTES_44
94.5
MONOCYTES_45
94.0
MONOCYTES_46
93.7
MONOCYTES_47
92.9
MONOCYTES_48
92.2
MONOCYTES_49
92.2
MONOCYTES_50
91.6
MONOCYTES_51
91.6
MONOCYTES_52
91.4
MONOCYTES_53
90.3
MONOCYTES_54
90.2
MONOCYTES_55
90.2
MONOCYTES_56
89.5
MONOCYTES_57
89.3
MONOCYTES_58
88.7
MONOCYTES_59
88.7
MONOCYTES_60
86.8
MONOCYTES_61
86.5
MONOCYTES_62
86.4
MONOCYTES_63
86.2
MONOCYTES_64
86.1
MONOCYTES_65
85.6
MONOCYTES_66
85.4
MONOCYTES_67
84.8
MONOCYTES_68
84.7
MONOCYTES_69
84.6
MONOCYTES_70
83.3
MONOCYTES_71
83.1
MONOCYTES_72
81.8
MONOCYTES_73
81.4
MONOCYTES_74
80.2
MONOCYTES_75
80.2
MONOCYTES_76
80.1
MONOCYTES_77
80.1
MONOCYTES_78
77.3
MONOCYTES_79
77.0
MONOCYTES_80
76.3
MONOCYTES_81
74.6
MONOCYTES_82
73.1
MONOCYTES_83
73.0
MONOCYTES_84
69.1
MONOCYTES_85
68.4
MONOCYTES_86
67.8
MONOCYTES_87
67.3
MONOCYTES_88
65.2
MONOCYTES_89
61.4
MONOCYTES_90
58.2
MONOCYTES_91
55.4
Show allShow less
Non-classical monocyte TPM: 212.7
Samples: 90
Max TPM: 321.8
Min TPM: 107.6
M2_1
321.8
M2_2
306.5
M2_3
294.5
M2_4
287.7
M2_5
282.6
M2_6
281.8
M2_7
279.6
M2_8
278.7
M2_9
276.6
M2_10
274.0
M2_11
272.5
M2_12
268.9
M2_13
268.8
M2_14
262.8
M2_15
262.3
M2_16
261.1
M2_17
258.2
M2_18
258.1
M2_19
255.8
M2_20
255.6
M2_21
254.9
M2_22
253.1
M2_23
251.0
M2_24
250.9
M2_25
249.3
M2_26
248.1
M2_27
247.4
M2_28
245.2
M2_29
240.9
M2_30
239.2
M2_31
238.0
M2_32
235.8
M2_33
232.9
M2_34
231.8
M2_35
231.5
M2_36
230.8
M2_37
229.3
M2_38
229.1
M2_39
227.1
M2_40
226.4
M2_41
226.3
M2_42
226.1
M2_43
224.9
M2_44
224.8
M2_45
223.7
M2_46
221.6
M2_47
219.6
M2_48
219.5
M2_49
216.6
M2_50
209.0
M2_51
208.1
M2_52
206.7
M2_53
203.7
M2_54
203.0
M2_55
200.5
M2_56
200.2
M2_57
197.3
M2_58
196.1
M2_59
192.8
M2_60
187.7
M2_61
185.3
M2_62
182.2
M2_63
182.2
M2_64
182.0
M2_65
182.0
M2_66
175.6
M2_67
173.2
M2_68
173.0
M2_69
167.9
M2_70
164.9
M2_71
164.6
M2_72
163.2
M2_73
162.7
M2_74
161.7
M2_75
160.7
M2_76
156.0
M2_77
153.0
M2_78
149.7
M2_79
147.5
M2_80
146.1
M2_81
144.6
M2_82
144.2
M2_83
142.6
M2_84
137.8
M2_85
135.9
M2_86
135.7
M2_87
125.7
M2_88
118.1
M2_89
110.2
M2_90
107.6
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.